Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0468 ATGGGAAATTGCAGCGGCGCAGCCTCCGGGGATAGCCAACCTGGCAACTCCGACGCCACCCATCCCGGCCGCCCTCCTCACCAACGCAACAATGGCATCACCGTCCTTCCTCCTGATTCCAACCCCTCTCGTCCTCATCCACCGTCTAAACCAGTTCTCTCTTCTGCCGTCGGCCGCGTCCTTGGTCGACCCATGGAGGACGTCCGTTCCACCTATGTCTTCGGCCGCGAACTCGGTCGTGGTCAATTTGGTGTCACCTACCTAGTCACTCACAAAGTTACTAAAGAACAATTCGCCTGCAAATCCATTGCTACCCGCAAACTGGTTAACCGCGACGACTTGGAGGACATTCGCCGCGAGGTCCAGATCATGCATCACCTCACTGGTCATCGGAACATTGTGGAGCTTAAGGGAGCTTACGAGGATCGATACTCTGTTAATTTGATCATGGAGCTTTGCGCTGGCGGGGAGCTGTTTGATAGGATCATAGCTAAGGGGCACTACTCGGAGCGAGCTGCATCGGAGTTATGTCGGCAGATCGTGACGGTAGTGCATGATTGTCACACCATGGGAGTCATGCATAGAGATTTGAAGCCTGAGAATTTCTTATTCCTCAGTAAGGAGGAAAGTTCACCTCTTAAGGCAACTGATTTCGGCCTCTCCGTATTCTTCAAGCCAGAAGATGTATTTAAAGATCTTGTTGGGAGTGCATATTATGTTGCTCCTGAGGTACTGCGTAGAAGCTACGGACCTGAAGCTGATATTTGGAGTGCCGGTGTTATATTATACATTCTTCTCAGCGGTGTCCCACCCTTCTGGGCAGAAAATGAACAGGGTATCTTCAATTCAATTCTTCGTGGGCATATTGACTTCGTATCAGATCCATGGCCTTCGATTTCAAGTAGTGCCAAAGACCTCATCAAAAAGATGCTTCAAGCTAACCCAAAGGATAGGCTTTCAGCAGTTGAAGTCCTTAATCATGCTTGGATGAGAGAAGATGGGGATGCATCTGATAAGCCGCTTGATATTGCTGTTCTAAGCAGAATGAAACAATTCCAGGCAATGAACAAGCTAAAAAAAGTAGCTTTGAAGGTCATTGCAGAAAATCTATCTGAAGAAGAAATCATTGGCTTAAAGGAAATGTTCAAATCCATGGACACAGATAACAGTGGAACAATCACTTTTGATGAGTTAAAAGCTGGTCTCCACAAACTGGGTAGTAAGCTTTCTGAGTCTGAAATAAGGCAGTTGATGGAAGCGGCTGATGTAGATGGAAATGGAGCCATTGATTATATTGAGTTTATATCGGCAACCATGCACATGAATAGAATGGAAAGAGAGGACCACCTATACAAAGCCTTTGAATATTTTGACAAGGATAAGAGCGGGTATATCACGAAGGAAGAGTTGGAATCTGCCCTTAGGAAGTATAATATGGGTGATGAGAAAACTATAAAGGAGATCATTGCTGAAGTTGACTCAGACAATGATGGAAAAATTAATTACGATGAGTTTGCGGCCATGATGAGGAAAGGCAACCCGGACTTCGTAAACAACAGACGGCGCTAA 1569 0.4627 MGNCSGAASGDSQPGNSDATHPGRPPHQRNNGITVLPPDSNPSRPHPPSKPVLSSAVGRVLGRPMEDVRSTYVFGRELGRGQFGVTYLVTHKVTKEQFACKSIATRKLVNRDDLEDIRREVQIMHHLTGHRNIVELKGAYEDRYSVNLIMELCAGGELFDRIIAKGHYSERAASELCRQIVTVVHDCHTMGVMHRDLKPENFLFLSKEESSPLKATDFGLSVFFKPEDVFKDLVGSAYYVAPEVLRRSYGPEADIWSAGVILYILLSGVPPFWAENEQGIFNSILRGHIDFVSDPWPSISSSAKDLIKKMLQANPKDRLSAVEVLNHAWMREDGDASDKPLDIAVLSRMKQFQAMNKLKKVALKVIAENLSEEEIIGLKEMFKSMDTDNSGTITFDELKAGLHKLGSKLSESEIRQLMEAADVDGNGAIDYIEFISATMHMNRMEREDHLYKAFEYFDKDKSGYITKEELESALRKYNMGDEKTIKEIIAEVDSDNDGKINYDEFAAMMRKGNPDFVNNRRR 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0468 522 ProSiteProfiles EF-hand calcium-binding domain profile. 409 444 IPR002048 GO:0005509
Lele53g0468 522 ProSiteProfiles EF-hand calcium-binding domain profile. 373 408 IPR002048 GO:0005509
Lele53g0468 522 FunFam Calcium-dependent protein kinase 1 338 513 - -
Lele53g0468 522 Gene3D Phosphorylase Kinase; domain 1 74 157 - -
Lele53g0468 522 FunFam calcium-dependent protein kinase 1 158 337 - -
Lele53g0468 522 FunFam Calcium-dependent protein kinase 1 74 157 - -
Lele53g0468 522 ProSiteProfiles EF-hand calcium-binding domain profile. 481 515 IPR002048 GO:0005509
Lele53g0468 522 ProSitePatterns EF-hand calcium-binding domain. 458 470 IPR018247 -
Lele53g0468 522 MobiDBLite consensus disorder prediction 1 56 - -
Lele53g0468 522 CDD STKc_CAMK 72 329 - -
Lele53g0468 522 SUPERFAMILY EF-hand 369 510 IPR011992 -
Lele53g0468 522 SUPERFAMILY Protein kinase-like (PK-like) 47 352 IPR011009 -
Lele53g0468 522 Pfam Protein kinase domain 72 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele53g0468 522 ProSitePatterns EF-hand calcium-binding domain. 493 505 IPR018247 -
Lele53g0468 522 MobiDBLite consensus disorder prediction 1 19 - -
Lele53g0468 522 ProSitePatterns EF-hand calcium-binding domain. 386 398 IPR018247 -
Lele53g0468 522 Gene3D Transferase(Phosphotransferase) domain 1 158 338 - -
Lele53g0468 522 Pfam EF-hand domain pair 378 438 IPR002048 GO:0005509
Lele53g0468 522 Pfam EF-hand domain pair 448 510 IPR002048 GO:0005509
Lele53g0468 522 ProSiteProfiles Protein kinase domain profile. 72 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele53g0468 522 ProSitePatterns Protein kinases ATP-binding region signature. 78 101 IPR017441 GO:0005524
Lele53g0468 522 Gene3D - 339 513 - -
Lele53g0468 522 SMART efh_1 449 477 IPR002048 GO:0005509
Lele53g0468 522 SMART efh_1 413 441 IPR002048 GO:0005509
Lele53g0468 522 SMART efh_1 484 512 IPR002048 GO:0005509
Lele53g0468 522 SMART efh_1 377 405 IPR002048 GO:0005509
Lele53g0468 522 ProSiteProfiles EF-hand calcium-binding domain profile. 445 480 IPR002048 GO:0005509
Lele53g0468 522 PANTHER SERINE/THREONINE-PROTEIN KINASE 68 505 - -
Lele53g0468 522 ProSitePatterns EF-hand calcium-binding domain. 422 434 IPR018247 -
Lele53g0468 522 SMART serkin_6 72 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele53g0468 522 ProSitePatterns Serine/Threonine protein kinases active-site signature. 192 204 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0468 Lele-ChrLele53 13238310 13251079 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0468 58 522 EF-hand Containing Proteins AT4G23650 80.215 0.0 801
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lele53g0468 Pkinase 1.1e-71 CL0016