Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0457 ATGCAGGTATCATCATCAGCTGGATTCTGCTACTTCGAGGTATCAGCGCCGGCGGCGGCGATTCAAACCCATATGGGGAACCATCATCATCAGATCCAAGGGTTTGAATCCGACCCGGCGGCGGACATGTTCAACCTCACAACCAGCATGGACATGATTGGATTCTCCAAGAATCTTCACCACCAACAGCAACAAACTAGTGAAAGTAACAGCCTTGTTTGGAAAAGCTTTCTGGGTAAACCCACAACCCATCACCACAATCCGGGTCCGGATCCTTCTTCTTCTTCTCCTCCTTCCAAGACGACGACGACGACCATGAATAATAATAGTAATAATGAATCTGGTTCCACCAATTTCTATCAGTACACAAAATCAAATTTCACAGCCAACGACGACAATCTGATTGTAGGAGAAGCTCATAACCATCATCATCATCATCACCATGATTCTTTGTCAACCACTTGGCAAGATAACAGATTACTTGTGGATGATTCTTCTTTAAGGTGTGTGTTCCCTTGTGAAGGAAACGAAAGGCCAAGTCAAGGCCTTTCGCTCTCTTTGAGTTCTAATAATCCCTTAAGCATTGGGTTACAATCTTTTGAACTAAGACAAACGAACAACCACCACCTTCATCATCATCAGAACCAATCAGATTTTGTTTCTGGAGACAAGTTATTGTTGGGGAAATCATCAATGAATCTTCCTCCTCATCATCATCAACAACAAGAAGCTTCTGGGAATCTGTATCAAGGCCATTTTCTGCTTAAGAACTCAAAGTATTTGGTTGCTGCACAGGAACTTCTCAACGAGTTTTGCAGTCTGGGAACGAAGCAAAGTGACCTGGTGAAACAAAAGTCATCATCAAGTCAGAAAAACAAACAGTGGGAAGATGATAACGGAATCGGCCCCTCCAAGAAACATCCCGTCGGCTCTCTAGAATTCATCGAATTACAGAAGAGAAAGACCAAACTACTCTCCATGCTTGAAGAGGTTGAGAGGAGATACAGGCACTACTGCAACCAAATGAAGGCGATGGTATCCTCGTTTGAGGCGGTGGCCGGGGCGGGAGCGGCGAGGGTTTACTCGGCATTGGCATTGAAGGCGATGTCGAGGCATTTCAGGTGTTTGAAAGATGGGATATTGAGTCAGATAGAAGTAGCAAGAAGAGGGATGGGAGAGAAAGATCCAGTTGCACCAGGAACCACAAAAGGTGAAACGCCAAGACTCAGAATCATAGATCAAGCTCTCAGACAACAGAGAGCTTTCCAGCAAATGAGCATGATGGAGTCTCATCCATGGCGTCCCCAAAGAGGCCTTCCAGAACGATCCGTTTCAGTTCTTCGCGCTTGGCTTTTCGAGCACTTCCTCCATCCGTACCCAAGTGATATGGATAAACATATCTTAGCTCGCCAAACTGGTCTCTCAAGAAGCCAGGTATCAAACTGGTTTATTAATGCAAGAGTGAGGCTGTGGAAGCCAATGGTGGAAGAGATGTACTTGGAGGAAATCAAGGAGCATGAAAACAACATGGCTTCTTCTGAGGGGGTCACCGATCCCGCCGTTGACGACAACATGCTGGCCGCCGCGGGTGGCCCGCCACCTACGACGCGTCTGGTAGATCAGAAGCCTGTCCAGAAGCACCGCCAGTTACTTCGAATAGACTCCGAGTGTGTGTCTTCGATCATAAACAACCAACTGGATCACAAAAACGAATCCACCAGGAACAACAATCCCCATCAACAAGATCAATTTGGATCTGTGGAGCTTGATTTTTCATCTTACAACACTCACAACTCAGGTGGTGGTATGATTTCTTACAGTAATGAGAATGGCAATGATAGTAATCAGAACTATAACAGTGGAGGAGGAGGAGGCGGTGTTTCGTTGACGCTAGGGTTACAGCAACACGGCGGAAGTGGGGTGAGTCTGGCGTTTCCTCCGCCGTCTCAGGCGTCACTGTTTTATCCAAGAGATCAAATGGAAGACTGTCAACCTGTTCAGTACTCGCTTTTGGACGGAGAAGCACAAAATCTTCCTTACAGAAATTTAATGGGTGCACAGTTGCTCCATGACTTAGCAGGATAG 2085 0.4628 MQVSSSAGFCYFEVSAPAAAIQTHMGNHHHQIQGFESDPAADMFNLTTSMDMIGFSKNLHHQQQQTSESNSLVWKSFLGKPTTHHHNPGPDPSSSSPPSKTTTTTMNNNSNNESGSTNFYQYTKSNFTANDDNLIVGEAHNHHHHHHHDSLSTTWQDNRLLVDDSSLRCVFPCEGNERPSQGLSLSLSSNNPLSIGLQSFELRQTNNHHLHHHQNQSDFVSGDKLLLGKSSMNLPPHHHQQQEASGNLYQGHFLLKNSKYLVAAQELLNEFCSLGTKQSDLVKQKSSSSQKNKQWEDDNGIGPSKKHPVGSLEFIELQKRKTKLLSMLEEVERRYRHYCNQMKAMVSSFEAVAGAGAARVYSALALKAMSRHFRCLKDGILSQIEVARRGMGEKDPVAPGTTKGETPRLRIIDQALRQQRAFQQMSMMESHPWRPQRGLPERSVSVLRAWLFEHFLHPYPSDMDKHILARQTGLSRSQVSNWFINARVRLWKPMVEEMYLEEIKEHENNMASSEGVTDPAVDDNMLAAAGGPPPTTRLVDQKPVQKHRQLLRIDSECVSSIINNQLDHKNESTRNNNPHQQDQFGSVELDFSSYNTHNSGGGMISYSNENGNDSNQNYNSGGGGGGVSLTLGLQQHGGSGVSLAFPPPSQASLFYPRDQMEDCQPVQYSLLDGEAQNLPYRNLMGAQLLHDLAG 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0457 694 SUPERFAMILY Homeodomain-like 434 499 IPR009057 -
Lele53g0457 694 Pfam Homeobox KN domain 450 489 IPR008422 GO:0003677|GO:0006355
Lele53g0457 694 MobiDBLite consensus disorder prediction 96 119 - -
Lele53g0457 694 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 112 514 - -
Lele53g0457 694 ProSiteProfiles 'Homeobox' domain profile. 430 493 IPR001356 GO:0003677
Lele53g0457 694 FunFam BEL1-like homeodomain protein 4 436 498 - -
Lele53g0457 694 CDD homeodomain 433 494 IPR001356 GO:0003677
Lele53g0457 694 Coils Coil 314 334 - -
Lele53g0457 694 MobiDBLite consensus disorder prediction 282 307 - -
Lele53g0457 694 MobiDBLite consensus disorder prediction 78 119 - -
Lele53g0457 694 MobiDBLite consensus disorder prediction 282 297 - -
Lele53g0457 694 SMART prehox3 249 382 IPR006563 -
Lele53g0457 694 Pfam Associated with HOX 255 380 IPR006563 -
Lele53g0457 694 Gene3D - 436 498 - -
Lele53g0457 694 SMART HOX_1 433 497 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0457 Lele-ChrLele53 12525883 12528692 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0457 158 693 Homeobox Transcription Factor Family AT5G41410 46.246 3.74e-139 419
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Lele53g0457 POX 3.3e-46 No_clan