Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0448 ATGCTGGACATTGTAGCAAAGTTATTGTCTTTATCACAGCAGAGACCAAGGGCTCTGTGCATCATGTCAGGCACTGGCACAGTTTCTTCTGTCACTCTACGCCAACCTGCCTCAACAAACATCAGTCTCACTTATGAGGGCCGATTTCAAATTTTATGCTTGTCTGGCTCATACTTGGTTGCTGAAGATGGTGGGCCTCGTGATAGAACAGGAGGTTTGAGTGTTTCTCTTTCTAGTCCTGATGGTCAAGTTATCGGTGGTGGTGTTGCTGTGCTTATCGCTGCAAGCCCCGTTCAGGTGGTGGTGTGCAGTTTCGTACATGGAAATGCTAAGATGAAGAAGCAAGTAACCTCTCCCAAGAGTAAGAATTCTCAGGCTCAGGCTCAGGCTCAGGCTCAACATGATGGTAACAAGTCAAATAGCCCTATTACAATAGCCACGTTTCCTCATGTAGATCCGAGAAACGCACTCGTGCATACTCATACCGGTATCGACTTGACTCGGGGCTGA 510 0.4745 MLDIVAKLLSLSQQRPRALCIMSGTGTVSSVTLRQPASTNISLTYEGRFQILCLSGSYLVAEDGGPRDRTGGLSVSLSSPDGQVIGGGVAVLIAASPVQVVVCSFVHGNAKMKKQVTSPKSKNSQAQAQAQAQHDGNKSNSPITIATFPHVDPRNALVHTHTGIDLTRG 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0448 169 MobiDBLite consensus disorder prediction 114 146 - -
Lele53g0448 169 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 3 132 IPR039605 GO:0003680
Lele53g0448 169 Gene3D - 2 127 - -
Lele53g0448 169 MobiDBLite consensus disorder prediction 114 148 - -
Lele53g0448 169 Pfam Plants and Prokaryotes Conserved (PCC) domain 3 106 IPR005175 -
Lele53g0448 169 SUPERFAMILY AF0104/ALDC/Ptd012-like 3 109 - -
Lele53g0448 169 ProSiteProfiles PPC domain profile profile. 1 129 IPR005175 -
Lele53g0448 169 CDD DUF296 3 105 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0448 Lele-ChrLele53 12191011 12192680 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0448 3 169 AT-hook Motif Nuclear Localized (AHL) Family AT1G63470 52.577 2.77e-51 166