Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0447 ATGGATGGGAGAGAAGCTATGGCATTCTCTGGTGGCTCACCTCCATATTACATGCATAGGGGAAATGTTTCGGGGTCTGGCTCTGGAACACAAGCCCAGGTGTTCCAACAATCACCTCCTGGGTTTAGACATTTGTCAAACGTTGGATTTCAAGCTCAACCAAATGTCCGAGGTGGTTCTGTGGGTTCCACATTACCAGTAGAGCCTCCTCGTAGCAATTTTAGTCAAGGAACTGACATAATAAGTTCCTCCCCCGGAGTACCTTCTTCAGGTGAACCCTTGAAAAAGAGGAGAGGAAGGCCTCGTAAATATGGTCCTGATGGTCCTGTTTCTTTGGGACTGTCTCCCATGTCTGCAACTGCTAATTCTACCCCAGGTTCAGGCACATCTTCCCAGAAACGGAATAGAGGACGTCCACCTGGTTCTGGCAGGAAGCAGCAACTAGCGGCTCTAGTGACTCACTTCGGTGTGAAGCTGTTGAATTCTTCTGTGTTATATCATTTGAAGCAAACAGGCTATTACTGTGTTCTTATAAGTATGATTAGCCTATGGCGGGTTATTGATATTCCTTATTTAGCTTCGTTTGATTTGGTTGCTTGTTAG 603 0.461 MDGREAMAFSGGSPPYYMHRGNVSGSGSGTQAQVFQQSPPGFRHLSNVGFQAQPNVRGGSVGSTLPVEPPRSNFSQGTDIISSSPGVPSSGEPLKKRRGRPRKYGPDGPVSLGLSPMSATANSTPGSGTSSQKRNRGRPPGSGRKQQLAALVTHFGVKLLNSSVLYHLKQTGYYCVLISMISLWRVIDIPYLASFDLVAC 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0447 200 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 55 154 IPR039605 GO:0003680
Lele53g0447 200 MobiDBLite consensus disorder prediction 23 89 - -
Lele53g0447 200 MobiDBLite consensus disorder prediction 115 137 - -
Lele53g0447 200 MobiDBLite consensus disorder prediction 1 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0447 Lele-ChrLele53 12187366 12188139 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0447 1 151 AT-hook Motif Nuclear Localized (AHL) Family AT1G63470 39.655 3.69e-17 76.6