Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0445 ATGGGGAAAGGTAGACCTAGGGCTGTGGAAAAAGGTGTAGCAGCGCAGAGTCTTAGTGTTTCATCGTCTGGGTCACTGAATATACCGTTAGCGCCTGTATATTTTCCCACCGAGGATGAGTTCACAGACCCCTTGGAATATATTTGTAAGATTAGACCTGAAGCTGAGCCATATGGAATTTGTAAGATTGTACCCCCAAAGAGTTGGAAACCGCCATTTGCTTTGGATCTAGATTTTTTTACTTTCCCCACTAAAGCACAGGAAATTCACAAGTTACAGGCTCGTCCTGCTGCGTGTGACTCCAAGACTTTTGAGTTGGAGTACTCTAGGTTTTTAGAGGATCACTGTGGTAAAAAGTCAAGGAAGAAAATTGTATTTGAAGGGGAAGAACTGGACTTGTGCATACTGTTTAATTCTGTTAAGAGATTTGGTGGATATGATAAGGTTGTGAAGGAAAAGAAATGGGGGGATGTTTCAAGGTTTGTAAGGCCAGGAAGAAAAATTACTGACTGTGCAAAGCATGTCCTATCACAATTGTACTGTGAACATTTGTATGATTATGAGAATTTCTATAATCAACTGAATCAAGGGACAGGTAAGAAAGGCATGCTTGAGGGTGAAAAAAGTGAGCATGGAGTTCAATCTTCAGGATCCAAGAGGATGAGAAGAAGTTCTGATTGTTTTAAAGTTAAGGATTGTAAAGTGCAGGAGGAAGAACATGACCAGATTTGTGAGCAATGCAGAAGTGGTTTGCATGGGGACGTGATGCTTTTGTGTGATAGGTGTGATAAGGGCTGGCATATATATTGTCTCTCACCACCCTTGAAGCAAATTCCTCCAGGAAACTGGTATTGCTTTAATTGCTTGAATTCTGACACGGACAGCTTTGGTTTTGTGCCTGGTAAGCAGTACACCTTGGAAGCCTTTAGACGTGTGGCTGATCGGTCAAGGAGGAGATGGTTTGGACCAGGACCTGTTTCAAGGGTGCAAATGGAGAAGAAATTTTGGGAGATTGTAGAGGGATCGGTTGGTGAGGTTGAGGTGATGTATGGAAGTGATCTGGATACGTCTGTATTTGGAAGTGGTTTTCCACGCTCAACTGTTCAGAAACCAGAGTCAATTGATCCAAAATTATGGGATGAATACTCATCTAACCCATGGAATCTTAACAATTTGCCTAAGTTAAAAGGGTCAATGCTTCAAGCTGTTCATCATAATATCACTGGCGTGATGGTACCCTGGCTGTATATTGGGATGTTATTCTCATCCTTTTGCTGGCATTTTGAGGATCATTGCTTTTACTCAATAAATTATCTACACTGGGGAAGGTTTAATAATATCAACTTGGTCAGTTGCTCATGTGTGCTTCAAATACTTCAGTTAAAGTTTCAGGATAGTGAAAAGTCTGATTGGATTGGAAAGTGGAATGTATATAGGAGGCAAATGATTGTAGTTTTCTTACAAATCCTGGGAGAGCCTAAATGCTGGTACAGTGTTCCTGGTAGTGAAGCCGGTGCTTTTGAGAAGGTGATGAGGAGCAGTCTTCCTGATCTTTTCGATGCGCAACCAGATCTGCTTTTTCAGCTTGTAACTATGTTAAACCCATCTGTTTTGCAAGAAAATGGAGTTCCAGTCTACAGCATAATTCAGGAGCCTGGGAATTTTGTTATTACCTTTCCCAGATCATACCATGGAGGTTTTAATCTTGGTTTAAATTGCGCAGAGGCAGTTAATTTTGCCCCTGCTGACTGGCTACCTTATGGTGCATTTGGAGCTGATCTTTACCAACGATATCACAAAGCTGCTGTCTTGTCTCATGAGGAGCTTCTTTGCGTAGTAGCCCAGTACAGTGACATTGATTCCAGATCATCTCCTTATTTGAAGAAAGAATTGCTTCGAATATCTGATAAACAGACATCTTGGAGAGAAAAACTCTGGAAAAATGGTATTGTCAAAACATCTCGCATGGCTCCTCGGCAATGTCCTCAATATGTGGGAACTGAAGAGGATCCATCATGCATTATTTGCCAGCAATATCTATATCTTTCTGCTGTTGTGTGCAGTTGCAGGCCATCTTCTTTTGTATGCCTGGAGCACTGGGAACATCTTTGTGAGTGTAAAACTGTAAAACTACGTCTTCTATATCGTTACTCACTTGCAGAATTGTATGACTTAGTACTTTCTTTGGACAATTATACTTCTGAGGAGAAAGCATTTGGAAGGAATATAAGAAAGAATTCTTCATTGGAATCATTTGTAAATGGTGGTTCCGTTAGTTTCTCACAGCTTGCTGCACAATGGCTTCTGCGATCTAGTGAGATTCTTCAGAATCCTTATTCAAGTGATGCTTTTGTTTCTGCACTAAGGGAAGCTGAACAGTTTCTTTGGGCTGGTCCGGAGATGAATTCTGTTCGCGATATGGTGAAGAATTTGATCGAAGCTCAGAAGTGGGCAGAAGGGATAAGAGATTGTTTAAGAAAAATTGAAGCCTGGTTGTGTGATCAGGACTCTGACATTGAGAAAGTTCACTTAGAATTTGTTGATGAGCTCCTAACATTTAATTCTCCACCAAGCAATGAGCCTGCTTATCATAAGTTGAAGGAATATACAGAAGGGGCCATATTGTTAAGTCAGGAGATTAATATTGCTTTGTCAAAGTGTTCAAAGATCTCTGAGTTGGAATCTCTACATTCTAGAGCTTGTGGCTCTCCAATCTACTTGAAAGATGTGAAGAATTTGGAAAGGAAAATTTCTTCTACTAAGGCATGGCTGCATAGAGCTAGAAGCTTCATCTCAGTAAAACATCCTGCTGCAGTAGAGCTTGATGTTCTTTACAAGTTGAAGTCGGAGATTATGGAGCTTCAAGTACAACTTCCAGAGATAGAAGTGATTCAGAATATATTAAGTCAAGCGGAATCTTGTAGTTCAAAATGTAGTGAGATATTAAAAGGTCCCATGAATCTAAAGAATGTCGATTTGCTGCTTAAGGAATGGGACAGCTTTATGGTTGATGTACCAGAAGTGAAGCTTCTGAGGCAATATTATAAGGATGGTGTTTCATGGGTTTCCAACTTTAACCGTGTATTAGGGACAACACATGAACGGGATGATCAACATAATGTTGTTGATGAATTGAAGGGTATTTTAGATGATGTTTTATCTTTAAAAATTCAAGTTGATGAGTTGCCATTAGTTGAGACTGAGCTGCGGAAAGCTCTTTGTCGGGAAAAGGCTCAAAAGGCACATAAATGTAAGATGCCTCTGGAATTTGTGGAAGAAGTGATGAATGATGCCAGACTGCTGCAAATTGAGGGAGAGAAATTATTTGTTGGTTTATCTGGTGTACTTGCTGTTGCCATACCTTGGGAGGAAAGGGCTAAAGAGATTCTTTCACATAAGGCTTCTTTCTCTGACTTTGAGGACATGATCAGGACCTCAGAAACCATTTTTATGATTCTTCCTTCCCTTAATGATGTGAAGGAAGCACTATTGGAAGCTAATTCATGGTTAATGAGTTCAAAACCATTCTTGGTTTCTTCTACTTGTCCATCAGATTCTCTAAGGAAAGTTGAAGACCTTCAGATGTTGGTTTCTCATTCGAAGCTTCTTAAAATATCTTTTGAAGAAATAAGGATACTTGAAATAGTTTTGCATAACTGCAAAGAATGGGAGTCTGAGGCATGCTCTGTATTGGAAGATGCCTGTCATATTTTTGAATTGGATGACATTGTTCATGGAATAAGCAGTGGCCTAATGTCCAGAGTTGAAGGTTTGATTGCCAGAATGCAGTCTACCACAAGATCTGCTTTATTGCTTGGTTTTGAGTTTGATGAGATTCCAAGACTTAAAGCAACTTGTTCTACACTGCGGTGGTGCAAAAAGATTATTTCCTTCTGCAGTCTTTCTCCTTCTTTAGAGGATGTTGTGGAGGCTACAGAACACCTTCCTCATTTGTGTGGTTCTGGGGCCCTATTGAATCTACTGATTGGTGGAGTCAAATGGCTTAGGCAAGCCTTGGAGGTAATTTCTGGACCACACAATTCTAGAAGAAAGTCAAGTGAAGTTGAAGATATTATTAGAGATTACCAGACTATTAATATTCCTTTTGCAGCAGTAATATACCAACTTGAAGAAGCCATAGGAAAACATAGGTTGTGGCAAGAACAGGTGAATCAATTCCTTAGCCTTTGTTCTGGGGAACGGTCTTGGTTATTGATGTTGAAACTCAAGGAACTAGGTGATACTGTTGCTTTCAGCTGCACGGAACTGGATTTGATTTTATCTGAAGTTGAGAAGGTGGAGGATTGGAAGAAACACTGCATGAATTTTCTAGGAACTTTAGTCCGAAATGAGAATTCACTTCTTGCTGCTCTGCAGAAGATGAAACAGAGTCTAGATAGATCATTGTCCATATATGGGAAGTTGAATGACTGCAAGGAAGAATGTTTTTGCTTTTACTGCTTTACTAATTCTGAAGATCAGGAATTTCTTACTTGCTCCACTTGTAGAAACTGGTAA 4518 0.3997 MGKGRPRAVEKGVAAQSLSVSSSGSLNIPLAPVYFPTEDEFTDPLEYICKIRPEAEPYGICKIVPPKSWKPPFALDLDFFTFPTKAQEIHKLQARPAACDSKTFELEYSRFLEDHCGKKSRKKIVFEGEELDLCILFNSVKRFGGYDKVVKEKKWGDVSRFVRPGRKITDCAKHVLSQLYCEHLYDYENFYNQLNQGTGKKGMLEGEKSEHGVQSSGSKRMRRSSDCFKVKDCKVQEEEHDQICEQCRSGLHGDVMLLCDRCDKGWHIYCLSPPLKQIPPGNWYCFNCLNSDTDSFGFVPGKQYTLEAFRRVADRSRRRWFGPGPVSRVQMEKKFWEIVEGSVGEVEVMYGSDLDTSVFGSGFPRSTVQKPESIDPKLWDEYSSNPWNLNNLPKLKGSMLQAVHHNITGVMVPWLYIGMLFSSFCWHFEDHCFYSINYLHWGRFNNINLVSCSCVLQILQLKFQDSEKSDWIGKWNVYRRQMIVVFLQILGEPKCWYSVPGSEAGAFEKVMRSSLPDLFDAQPDLLFQLVTMLNPSVLQENGVPVYSIIQEPGNFVITFPRSYHGGFNLGLNCAEAVNFAPADWLPYGAFGADLYQRYHKAAVLSHEELLCVVAQYSDIDSRSSPYLKKELLRISDKQTSWREKLWKNGIVKTSRMAPRQCPQYVGTEEDPSCIICQQYLYLSAVVCSCRPSSFVCLEHWEHLCECKTVKLRLLYRYSLAELYDLVLSLDNYTSEEKAFGRNIRKNSSLESFVNGGSVSFSQLAAQWLLRSSEILQNPYSSDAFVSALREAEQFLWAGPEMNSVRDMVKNLIEAQKWAEGIRDCLRKIEAWLCDQDSDIEKVHLEFVDELLTFNSPPSNEPAYHKLKEYTEGAILLSQEINIALSKCSKISELESLHSRACGSPIYLKDVKNLERKISSTKAWLHRARSFISVKHPAAVELDVLYKLKSEIMELQVQLPEIEVIQNILSQAESCSSKCSEILKGPMNLKNVDLLLKEWDSFMVDVPEVKLLRQYYKDGVSWVSNFNRVLGTTHERDDQHNVVDELKGILDDVLSLKIQVDELPLVETELRKALCREKAQKAHKCKMPLEFVEEVMNDARLLQIEGEKLFVGLSGVLAVAIPWEERAKEILSHKASFSDFEDMIRTSETIFMILPSLNDVKEALLEANSWLMSSKPFLVSSTCPSDSLRKVEDLQMLVSHSKLLKISFEEIRILEIVLHNCKEWESEACSVLEDACHIFELDDIVHGISSGLMSRVEGLIARMQSTTRSALLLGFEFDEIPRLKATCSTLRWCKKIISFCSLSPSLEDVVEATEHLPHLCGSGALLNLLIGGVKWLRQALEVISGPHNSRRKSSEVEDIIRDYQTINIPFAAVIYQLEEAIGKHRLWQEQVNQFLSLCSGERSWLLMLKLKELGDTVAFSCTELDLILSEVEKVEDWKKHCMNFLGTLVRNENSLLAALQKMKQSLDRSLSIYGKLNDCKEECFCFYCFTNSEDQEFLTCSTCRNW 1505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0445 1505 Gene3D Cupin 287 580 - -
Lele53g0445 1505 ProSiteProfiles Zinc finger PHD-type profile. 241 291 IPR019787 -
Lele53g0445 1505 Pfam PHD-finger 243 290 IPR019787 -
Lele53g0445 1505 Pfam jmjN domain 32 65 IPR003349 -
Lele53g0445 1505 SUPERFAMILY ARID-like 81 197 IPR036431 GO:0003677
Lele53g0445 1505 ProSitePatterns Zinc finger PHD-type signature. 244 288 IPR019786 -
Lele53g0445 1505 SMART ARID_2 95 188 - -
Lele53g0445 1505 SUPERFAMILY FYVE/PHD zinc finger 237 291 IPR011011 -
Lele53g0445 1505 SMART JmjN_1 30 71 IPR003349 -
Lele53g0445 1505 Pfam PLU-1-like protein 770 982 IPR013637 -
Lele53g0445 1505 Pfam PLU-1-like protein 940 1236 IPR013637 -
Lele53g0445 1505 Pfam PLU-1-like protein 1185 1439 IPR013637 -
Lele53g0445 1505 PANTHER LYSINE-SPECIFIC DEMETHYLASE 27 968 - -
Lele53g0445 1505 Pfam C5HC2 zinc finger 673 724 IPR004198 -
Lele53g0445 1505 CDD PHD_RSF1 244 288 - -
Lele53g0445 1505 SMART PHD_3 243 289 IPR001965 -
Lele53g0445 1505 Pfam ARID/BRIGHT DNA binding domain 112 188 IPR001606 GO:0003677
Lele53g0445 1505 Gene3D Cupin 13 127 - -
Lele53g0445 1505 ProSiteProfiles JmjN domain profile. 31 72 IPR003349 -
Lele53g0445 1505 SMART bright_3 99 193 IPR001606 GO:0003677
Lele53g0445 1505 FunFam Transcription factor jumonji (JmjC) domain-containing protein 18 121 - -
Lele53g0445 1505 ProSiteProfiles ARID domain profile. 98 192 IPR001606 GO:0003677
Lele53g0445 1505 SUPERFAMILY Clavaminate synthase-like 378 613 - -
Lele53g0445 1505 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 187 286 IPR013083 -
Lele53g0445 1505 CDD ARID 100 188 - -
Lele53g0445 1505 Pfam JmjC domain, hydroxylase 483 579 IPR003347 -
Lele53g0445 1505 Pfam JmjC domain, hydroxylase 414 444 IPR003347 -
Lele53g0445 1505 ProSiteProfiles JmjC domain profile. 381 596 IPR003347 -
Lele53g0445 1505 SMART cupin_9 381 596 IPR003347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0445 Lele-ChrLele53 12149130 12171852 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0445 31 95 JUMONJI Transcription Factor Family AT1G08620 56.522 2.43e-09 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Lele53g0445 PLU-1 6.6e-08 No_clan