Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0430 ATGAGGTTATGGAGTTCATTGTTGTTTATCGGTCTGATTTACACGGTCTCTTTTGTGGCTTGTGATAATGCTGTGGCTGCCAAAGAAGTTTTGGCGCTTAATGCTTTCAAAGATGCTATTTATGAAGATCCATTTCAAGTTTTGTCCAATTGGAATACGATGGATTCAGATCCTTGTGACTGGGATGGCGTTTTCTGCAATCCGGTCCAAGATCATGTTGTTAAGCTAAACATTTCGAGATCATCATTAAAGGGATTTCTAGCACCAGAATTGGGACGAATCGCGTACTTGGAAGAATTGATTTTGCACGGCAATAAACTGATTGGAACAATACCTAAAGAGCTGGGCATGTTGAAATCTCTTAAGGTCTTGGATTTGGGGATGAATCAGTTATCAGGACCAATTCCTCCAGAGATTGGAAATTCAACTCAATTAGTGAAAATAAACCTGCAGTTCAACGGGTTGACTGGTAGACTACCTCCAGATCTTGGAAATTTGAAATACCTTCAAGAACTAAGACTGGATAGGAATAAGCTTCAAGGGCATGTGCCTGCTGACAGCAGTTCCGATTTTACTACAAATATGCGTGGAATGTATGCATCAAATGCAAATTTACCTGGTTTCTGTCGTTCATCTCAGTTGAAAGTAGCAGATTTTTCCTATAATTTCTTTGTTGGTAGCATCCCTAAATGCTTGGGGTATCTTCCAAGGTATAGCTTTCAAGGGAATTGCCTCCAGATCAAGGATTTAAAGCAACGCCCTTCTGTGCAATGTGCTGGTGCTTCACCTGCCAGGGGCCATCCAGTAATCAACCCAAAGCACCGATCAGCTGATTATTTGTCCAAACATCAAGGAGAATCAAAACCTACTTGGCTTTTGGCTCTAGAAATAGTGACAGGAACCATGATTGGTTCTCTCTTTTTAGTTTCTCTTCTAACTGTTTTTCAGTGGTTTAACAATAAATCGTCTATCATTATTTCTTGGAAGAAATCTGCAAGCGAGAAGGATAATTTGACAGTATATATAGACTCTGAGATGCTGAAAGATATAAGGAAGTATAGCAGACAAGAGATCGAAGTGGCTTGTGAAGATTTCAGCAACATCATTGGGTCCTCACCTGTCAGTGTGGTCTACAAGGGCACCATTAAAGGTGGGCCTGAGATTGCCGTAATTTCCCTTTGCATTAAGGAGGAGAATTGGACAGGTTACCTCGAGCTCTATTTTCAGAGAGAGGTGGCAGACTTGGCGAGGCTAAATCATGAGAATATAGGAAAGCTACTAGGATATTGTAAAGAGAACGCTCCATTTACAAGGATGCTGGTTTTTGAATATGCTTCAAATGGGACACTTTCAGAGCACCTACATTATGGAGAAGGATGCCAGTTATCATGGACAAGGCGTATGAATATTGTTATAGGCATTGCACGCGGTCTCAAATATCTACACTCAGAAGTTGAGCCTCCATTCACTATATCGGAGCTAAATTCTGGTGCTGTATACCTAACAGAAGATTTTGCCCCAAAGCTCGTTGATTTTGAAAGCTGGAAGACAATCCTGAAAAGATCAGGAAGAAATTCAGGTTCTGTTGGCAGCCAAGGTGCCGTTTGTGTTCTTCGAAATTCCATTGAAGCTCGCCATCTTGATACCCAAGGAAACATGTATGCTTTTGTGCTTCTTCTACTTGAGATCGTCAGCGGAAGATCTCCCTATTGCAAGGACAATGGTTACTTGGGGGAATGGGCGAAGGACTATCTTGAAAATCCAGAAGAAATGCCATCTTTGGTGGATCCTGAATTGAAACATTTTAGAGATGAAGACCTGAAAGTAATATGGGAGGTAATAAACCTCTGTATCAATTCTGACCCCACAAGGCGTCCAGGGATGCAAGAGTTGTGTAGTATTCTGGAGAGCAGAATCGACACATCCATAACTTCGGAGCTCAAGGCATCATCTTTGGCTTGGGCTGAACTTGCACTCTCATCTTGA 1986 0.4164 MRLWSSLLFIGLIYTVSFVACDNAVAAKEVLALNAFKDAIYEDPFQVLSNWNTMDSDPCDWDGVFCNPVQDHVVKLNISRSSLKGFLAPELGRIAYLEELILHGNKLIGTIPKELGMLKSLKVLDLGMNQLSGPIPPEIGNSTQLVKINLQFNGLTGRLPPDLGNLKYLQELRLDRNKLQGHVPADSSSDFTTNMRGMYASNANLPGFCRSSQLKVADFSYNFFVGSIPKCLGYLPRYSFQGNCLQIKDLKQRPSVQCAGASPARGHPVINPKHRSADYLSKHQGESKPTWLLALEIVTGTMIGSLFLVSLLTVFQWFNNKSSIIISWKKSASEKDNLTVYIDSEMLKDIRKYSRQEIEVACEDFSNIIGSSPVSVVYKGTIKGGPEIAVISLCIKEENWTGYLELYFQREVADLARLNHENIGKLLGYCKENAPFTRMLVFEYASNGTLSEHLHYGEGCQLSWTRRMNIVIGIARGLKYLHSEVEPPFTISELNSGAVYLTEDFAPKLVDFESWKTILKRSGRNSGSVGSQGAVCVLRNSIEARHLDTQGNMYAFVLLLLEIVSGRSPYCKDNGYLGEWAKDYLENPEEMPSLVDPELKHFRDEDLKVIWEVINLCINSDPTRRPGMQELCSILESRIDTSITSELKASSLAWAELALSS 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0430 661 ProSiteProfiles Protein kinase domain profile. 363 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele53g0430 661 Pfam Leucine rich repeat N-terminal domain 27 67 IPR013210 -
Lele53g0430 661 Pfam Protein tyrosine and serine/threonine kinase 366 634 IPR001245 GO:0004672|GO:0006468
Lele53g0430 661 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 26 189 - -
Lele53g0430 661 Gene3D Ribonuclease Inhibitor 26 258 IPR032675 -
Lele53g0430 661 SUPERFAMILY L domain-like 27 236 - -
Lele53g0430 661 FunFam Inactive receptor-like serine/threonine-protein kinase 337 444 - -
Lele53g0430 661 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
Lele53g0430 661 Gene3D Phosphorylase Kinase; domain 1 337 444 - -
Lele53g0430 661 SUPERFAMILY Protein kinase-like (PK-like) 340 635 IPR011009 -
Lele53g0430 661 PANTHER PROTEIN MALE DISCOVERER 2 17 659 - -
Lele53g0430 661 Gene3D Transferase(Phosphotransferase) domain 1 445 651 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0430 Lele-ChrLele53 8826049 8830586 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0430 42 640 Receptor kinase-like Gene Family AT5G45780 27.705 6.46e-56 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Lele53g0430 PK_Tyr_Ser-Thr 1.3e-19 CL0016