Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0412 ATGGCTCGTTTTAATTTTGGTGAAACGCTATCGTTTGGAGGTTCAAGCCATGGACCGGGCAAGCTAATTGTTCCGTTTCAGACAACTACGAGCTCGTTAAGGGTCTTTCTTCTACATGGAAGCTTAGAAATATTCGTGAAAGAGGCCAAAAACCTTCCAAATTTAGATATGGTCCATCAGAAAATGGGGGATATGTTTTCCAGATTACCTGGAAAACTTGGCCAAAAAATTGAAAAGCATATGTCAAATACAATCGTTACTAGTGATCCATACGTGACTGTATCTCTTGCGGGTGCTGTAATTGCAAGAACATTTGTGATCGAGAACGATGAGAACCCTAATTGGATGCAGCATTTCAATGTTTCCGTAGCTCATTATGCTTCAGAAGTATATTTTGTGGTAAAAGATAGTGATATTGTGGGCTCACAAGTCATGGGTGTGGTTGGAATTCCTTTGGAACAGTTATACACAGGCTCCAAAGTTGAAGGGTCCTTTCCAATCCTTAATTCTAGCGGGAAACTTTGCAAAGATGGAGCAGTTTTGAGTTTATCCATTCAATACATTCCTTTTGATAAGGTGGCTCTTTATGGTCACGGAATAAGGGCAGGTCCTAGTTATGAAGGGGTTCCAGGTACATACTTTCCTCTTAGGAAGGGTGGTCGAGTTAGACTTTATCAAGATGCTCATGTTCATGGAGGTTCCCTTCTTCCACCTAATTTGAAGATGGAAGGTGGTGTGATTTATGAGCATGGCAATTGTTGGCGTGACATCTTTGAGGCTATAAGTCAGGCCCGGCGATTAGTATACATTGTGGGGTGGTCTGTGTACTACAATGTTAGACTGGTTCGAGATGCTGGTGATGCTAAAGCTTGCACTTTAGGTGATCTTCTCAAAATCAAATCACAGGAAGGTGTGAGAGTGCTGCTACTTGTGTGGGACGATCCTACTTCCAGAAGCATGATAGGTGGATATAAAACGATATACACCCGCTCTGCTGTATTTGGTTACTTCATGGTTCAGATGATATATTGA 1032 0.4176 MARFNFGETLSFGGSSHGPGKLIVPFQTTTSSLRVFLLHGSLEIFVKEAKNLPNLDMVHQKMGDMFSRLPGKLGQKIEKHMSNTIVTSDPYVTVSLAGAVIARTFVIENDENPNWMQHFNVSVAHYASEVYFVVKDSDIVGSQVMGVVGIPLEQLYTGSKVEGSFPILNSSGKLCKDGAVLSLSIQYIPFDKVALYGHGIRAGPSYEGVPGTYFPLRKGGRVRLYQDAHVHGGSLLPPNLKMEGGVIYEHGNCWRDIFEAISQARRLVYIVGWSVYYNVRLVRDAGDAKACTLGDLLKIKSQEGVRVLLLVWDDPTSRSMIGGYKTIYTRSAVFGYFMVQMIY 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0412 343 PANTHER PHOSPHOLIPASE D 32 321 IPR015679 -
Lele53g0412 343 SUPERFAMILY Phospholipase D/nuclease 209 319 - -
Lele53g0412 343 ProSiteProfiles C2 domain profile. 18 165 IPR000008 -
Lele53g0412 343 CDD C2_plant_PLD 35 188 - -
Lele53g0412 343 Pfam C2 domain 40 167 IPR000008 -
Lele53g0412 343 Gene3D C2 domain 27 185 IPR035892 -
Lele53g0412 343 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 38 189 IPR035892 -
Lele53g0412 343 SMART C2_3c 41 164 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0412 Lele-ChrLele53 5352771 5354733 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0412 32 326 Phospholipase D Gene Family (Wang group) AT2G42010 65.541 3.97e-134 407