Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0377 ATGGCGAGACTTGGGATTTCTTTGTTATTACTGCTAAACCTCCTCATTAACACACCAGAATCCGCCATAGCCAAACCTTCAAACGCAACAGATTTCCTAAAGTCCTCTTGCAGAGCCACTCGCTACCCGGTTCTCTGCGTTCAGTCCCTATCAAGCTACACAAGCGTGATTCATCAAAGCCAGAGACAAATTGCCATCACTGCTCTCTCCGTCAGCATCTCAAGAACTCGATCATGTTCCTCCTTCGTCCACAACCTTGGCCAAGCAACAAGAATGAAAAACCCCATAGAACACAGAGCTGTTCAAGACTGCATAGAGAACATGGCTGATAGCCTGGACCGGCTTCACCAATCAGTTCAGGAGCTGGGCCGAACCGGTCGGGTCGTTGGTCAGGATTTTGAGTGGCATATAAGCAATGTTCAGACTTGGGTTAGTGCTGCTCTTACAGATCAAGACACATGTCTCGATGGGTTCTCCGGTTCTGGTTCAAATGAAAACCTTAAGGCTGATATCAGGAGCAGAGTTTTGAATGTCGCTCAAGTTACTAGTAATGCTCTTGCTTTGGTTAATCGCTTCGCTTCAAGGCATCATCTTCCACTTCAAGGGTTGTTTCTTAGTTCAGTGTTTTACTTTCATGTAACAGATCTTGATTTTCCACTTCAAGGCTTCTTTCTTAGTTCAAGGGCATGA 690 0.4565 MARLGISLLLLLNLLINTPESAIAKPSNATDFLKSSCRATRYPVLCVQSLSSYTSVIHQSQRQIAITALSVSISRTRSCSSFVHNLGQATRMKNPIEHRAVQDCIENMADSLDRLHQSVQELGRTGRVVGQDFEWHISNVQTWVSAALTDQDTCLDGFSGSGSNENLKADIRSRVLNVAQVTSNALALVNRFASRHHLPLQGLFLSSVFYFHVTDLDFPLQGFFLSSRA 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0377 229 CDD PMEI-like_3 35 194 - -
Lele53g0377 229 Pfam Plant invertase/pectin methylesterase inhibitor 31 188 IPR006501 GO:0004857
Lele53g0377 229 FunFam Pectin methylesterase inhibitor 1 28 192 - -
Lele53g0377 229 PANTHER PECTINESTERASE INHIBITOR-LIKE 9 188 - -
Lele53g0377 229 Gene3D Invertase/pectin methylesterase inhibitor family protein 28 192 IPR035513 -
Lele53g0377 229 TIGRFAM PME_inhib: pectinesterase inhibitor domain 6 190 IPR006501 GO:0004857
Lele53g0377 229 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 192 IPR035513 -
Lele53g0377 229 SMART PMEI_2 28 188 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0377 Lele-ChrLele53 3571615 3572511 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0377 33 189 Carbohydrate Esterase AT3G14310 29.936 1.03e-20 88.6