Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0372 ATGAACACATTTTCACATGTTCCTCCGGGGTTTCGATTCCATCCGACAGACGAAGAACTGGTTGATTACTACCTGAGAAAGAAGATAGCTTCCAAAAGGATTGATCTTGATGTCATCAAAGATGTTGATCTCTACAAAATTGAGCCTTGGGATCTTCAAGAACTGTGCAGAATAGGAAGAAGAGCTCCTAATGGCTTGAAATCTGACTGGATCATGCATGAATATCGGCTTGAAACTAATGAAAATGCTACTCCTCAGGAAGAAGGGTGGGTCGTGTGCAGAGTGTTCAAGAAGAGAATGACAACAGTGAGAAAAGTAGGAGAATATGAATCACCATGTTGGTACGATGAAGCAGCCTCGTTGATGCAAGAGCTTGATCAATCTCCAAGGAGTCATCATCATCATCATAATAATAATATTATTTCTGCATCACCTTACTACGCATGCAAGCAAGAGTTTGAATTCCAATACAACTTTAATAATCTCCCTCCCGATGCTTTCCTCCAACTCCCTCAGCTTGAAAGCCCTAATAAACTCCCCACTATCTTCAGCAACGCCGCCGCCTTCGATCATCATCACAGAACCACCGCCACCGCCATGCACTCATCGACGGCGCTTTATGATGATCAAGTGATCACTGATTGGAGGGTGTTTGATAAGTTTGTTGCTTCTCAGCTGAGTCAAGATATTCATCAACAACAACATGCTTCCAAGGAAACAACTTGTGATAATAATTCCAATGCTGACGTGGACGTTGTTGCTGCCGCTGAACAAGTTACTATGTTGGAAAATGCATCAGCATCCACCACCACCACAGCCTGCGACATTGAACCATGGAAGTGA 843 0.433 MNTFSHVPPGFRFHPTDEELVDYYLRKKIASKRIDLDVIKDVDLYKIEPWDLQELCRIGRRAPNGLKSDWIMHEYRLETNENATPQEEGWVVCRVFKKRMTTVRKVGEYESPCWYDEAASLMQELDQSPRSHHHHHNNNIISASPYYACKQEFEFQYNFNNLPPDAFLQLPQLESPNKLPTIFSNAAAFDHHHRTTATAMHSSTALYDDQVITDWRVFDKFVASQLSQDIHQQQHASKETTCDNNSNADVDVVAAAEQVTMLENASASTTTTACDIEPWK 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0372 280 Gene3D NAC domain 60 102 IPR036093 GO:0003677|GO:0006355
Lele53g0372 280 Gene3D NAC domain 16 59 IPR036093 GO:0003677|GO:0006355
Lele53g0372 280 Pfam No apical meristem (NAM) protein 8 57 IPR003441 GO:0003677|GO:0006355
Lele53g0372 280 ProSiteProfiles NAC domain profile. 7 154 IPR003441 GO:0003677|GO:0006355
Lele53g0372 280 SUPERFAMILY NAC domain 5 98 IPR036093 GO:0003677|GO:0006355
Lele53g0372 280 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 6 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0372 Lele-ChrLele53 3447549 3449730 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0372 1 277 NAC Transcription Factor Family AT1G62700 38.847 1.63e-73 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele53g0372 NAM 1.5e-13 No_clan