Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0336 ATGGACGAAGGACCACCAAACAGAGAACTTTATGCACTCTTAAACTTGTCGCCGGATGCCTCCGATGAAGAAATCCGAAGAGCTTATCGTCAATGGGCACAAGCCTACCACCCTGATAAATACCAAGCTCCCCACATGAAAGACATTGCTACTGCAAACTTTCAACGTATTTGTGAAGCGTATGAAGTTTTGTCGGATCCAAATAAAAGGCAAATATATGACATATATGGCATGGAAGGTTTGACCTCTGGACTGGAACTTGGTTCGAAGCTGGATAAAGCAGAAGAGATAAAGGCTGAATTTGAGAGGCTACGTCAAATGAAGGAGATGCAAAAGATGTCAGCACATTTTAGAACTTCTGGTACAATTCTGGCCAATATGTCTTTGCCACACTGGCGAAATGGTGATGGCCTCATGAGAGGAATGTCTATGACCAGCGAAGTTCAGTCTCAGTTATCAAAACGTAATAGTGTTGCAATTGGTGGCAATTTAGCAGTTAATGGCAATGCAGGTGGTGGGGTTGCTACTGCCTTGTTTAGGCATAAAATTTCAGAAGTTTCTTCCATAGAGTTTATGGCTTCTGCTGGATTGCGAGCACTGATAGGGGTGCAAACAACACGTCAATTATCAGCACATTCAGCTGCTACGTTGGGCCTTGCTATGTCTATGCAAGATGGTTCATTGAATCTTTCTAATTCATTTAACCGCCAACTGTCAGAAACAGCAAGTGGACATATACAACTCGCGTTGGGGCCACAGTCATCTATAGCTGTAGGGTGGCAAAAGAAAGATGAGAGAAGATCTGCCTCAGGAGAAGTGAAGTTTGGCACAAGTTCTTTTGATGTAGCAGCTCATTATACTCATCACTTGTCTTCTAAATCTCATGGCCGGATCGCTGGCAGAATTGGGAGTTCAACCCTTGAGATTGAAATCGGGGGTGGGAGGAAGTTATCCAAGTTCAGCACTGTGCGCTGGTTGTATACAATAGGAATTCAGGGTATTATTTGGAGATTTGAACTGCACCGTGGTGGCCAAAAGTTAATTATCCCTATTTTGCTGACCAGACATTTGGACCCTGTCTTTGCTAGTGGGGCACTCATTATTCCAGCATCTCTATACTTCCTTTTGAAGAAATTTTTAATCAAACCCTATTACCTTAAAAGGAATAAGCAGAAGGCTCTAGAGAATGCAGAGAAAACTTCTTCTCAGGTTCAAGAAGCAAGGGTTGCCGCAGAGAAGGCTCAGCAATTACAACAAACTGTTGCTAATAGGAAAAAAAATAAGCAATTAGAAACAGGTGGACTAGTTATTACCAGAGCACTATATGGAAATCACGTTATTTTGAACAAGATAAATGCTTCAAGTCATGAATCAGCTTCAGATATCATAGATGTGACAATACCTCTAAATTTCCTTGTTAGTGATTCTGGCCAACTCAAGCTTCATGACGGTGTAAAAAAATCAGGCATCATGGGCTTTTGCGATCCATGTCCAGGAGAACCTAAAAAGTTGTATGTAGAGTACTCTTACGCTGGCAACCAATACAAGGTCTTGGTTGATGATTGTGAAGAGCTATTGATACCCCGGGGAGTTCACAGGATTTGA 1605 0.4212 MDEGPPNRELYALLNLSPDASDEEIRRAYRQWAQAYHPDKYQAPHMKDIATANFQRICEAYEVLSDPNKRQIYDIYGMEGLTSGLELGSKLDKAEEIKAEFERLRQMKEMQKMSAHFRTSGTILANMSLPHWRNGDGLMRGMSMTSEVQSQLSKRNSVAIGGNLAVNGNAGGGVATALFRHKISEVSSIEFMASAGLRALIGVQTTRQLSAHSAATLGLAMSMQDGSLNLSNSFNRQLSETASGHIQLALGPQSSIAVGWQKKDERRSASGEVKFGTSSFDVAAHYTHHLSSKSHGRIAGRIGSSTLEIEIGGGRKLSKFSTVRWLYTIGIQGIIWRFELHRGGQKLIIPILLTRHLDPVFASGALIIPASLYFLLKKFLIKPYYLKRNKQKALENAEKTSSQVQEARVAAEKAQQLQQTVANRKKNKQLETGGLVITRALYGNHVILNKINASSHESASDIIDVTIPLNFLVSDSGQLKLHDGVKKSGIMGFCDPCPGEPKKLYVEYSYAGNQYKVLVDDCEELLIPRGVHRI 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0336 534 PRINTS DnaJ domain signature 49 69 IPR001623 -
Lele53g0336 534 PRINTS DnaJ domain signature 11 29 IPR001623 -
Lele53g0336 534 PRINTS DnaJ domain signature 29 44 IPR001623 -
Lele53g0336 534 PRINTS DnaJ domain signature 69 88 IPR001623 -
Lele53g0336 534 SUPERFAMILY Chaperone J-domain 7 80 IPR036869 -
Lele53g0336 534 SMART dnaj_3 8 69 IPR001623 -
Lele53g0336 534 CDD DnaJ 9 66 IPR001623 -
Lele53g0336 534 Pfam DnaJ domain 10 74 IPR001623 -
Lele53g0336 534 ProSitePatterns Nt-dnaJ domain signature. 54 73 IPR018253 -
Lele53g0336 534 Coils Coil 91 111 - -
Lele53g0336 534 PANTHER CHAPERONE PROTEIN DNAJ 13 3 534 IPR042162 -
Lele53g0336 534 Coils Coil 387 417 - -
Lele53g0336 534 ProSiteProfiles dnaJ domain profile. 9 77 IPR001623 -
Lele53g0336 534 Pfam DnaJ-like protein C11, C-terminal 383 528 IPR024586 -
Lele53g0336 534 Gene3D DnaJ domain 5 85 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0336 Lele-ChrLele53 2914372 2928867 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0336 11 74 C2H2 Transcription Factor Family AT1G74250 46.970 1.42e-08 55.5