Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0317 ATGTTCGGACAGGCTACTTACGATTCGGATTTAACCTTGTTGGAGTCAATTCGACTCCACTTGCTCTGTGACTTGGAGACTGCTTTTGCTGATTCGGATACTTCTTCGGGTTCTGCTCCAGTTTACGCTCGGAGCTCCAGTTTCAGCAGCTTGTACCCGTGTTTGACGGACAATTGGGGCGAATTGCCGCTCAAGGAGGACGATTCTGAAGACATGGTGCTCTACGGTGTCCTCCGTGATGCCGTCAACGTCGGGTGGGTTCCCTCGCTCGATGTCGGGTCACCCGAGAGCATTTCTTCTGGTTTCGTCCCAACCGTTACGGTGAAATCGGAGCCCGATGTTTTGCATGTTTTGGATTCCCCCGCTGGCCCTCCTCCCGGGGTAAAGCAAGAGAAGGTGGCTGAGGCAGTGGTACCAGCAGCAGTTCCGTCGAAGGGGAAGCATTACCGAGGAGTAAGACAAAGGCCGTGGGGGAAATTCGCGGCGGAGATCCGTGACCCGGCGAAGAATGGTGCTCGGGTTTGGCTCGGAACATTCGAGACAGCCGAAGACGCGGCTCTGGCTTACGATCGAGCCGCGTACAGGATGCGAGGCTCACGCGCTCTGCTGAATTTCCCACTGAGAGTGAACTCGGGCGAACCCGACCCGGTAAGAGTGACATCGAAGAGGTCATCGCCGGAGAGATCTTGGTCGAGCTTGTCGTCTTCGTCGTCGTCCACTGAGAGCGGGACGTCGGCGAAGAGAAGGAAGAAGGAGGCGGTGGGGACAACAGGGGTAAAGGCGACAGGGCAAGTGGGGAGCCAAGGGGGAACGACGTCGTTATTGGGGAGCTAA 834 0.5695 MFGQATYDSDLTLLESIRLHLLCDLETAFADSDTSSGSAPVYARSSSFSSLYPCLTDNWGELPLKEDDSEDMVLYGVLRDAVNVGWVPSLDVGSPESISSGFVPTVTVKSEPDVLHVLDSPAGPPPGVKQEKVAEAVVPAAVPSKGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAYRMRGSRALLNFPLRVNSGEPDPVRVTSKRSSPERSWSSLSSSSSSTESGTSAKRRKKEAVGTTGVKATGQVGSQGGTTSLLGS 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0317 277 MobiDBLite consensus disorder prediction 209 277 - -
Lele53g0317 277 MobiDBLite consensus disorder prediction 223 243 - -
Lele53g0317 277 MobiDBLite consensus disorder prediction 260 277 - -
Lele53g0317 277 FunFam Ethylene-responsive transcription factor 2 147 207 - -
Lele53g0317 277 SMART rav1_2 148 212 IPR001471 GO:0003700|GO:0006355
Lele53g0317 277 CDD AP2 147 206 IPR001471 GO:0003700|GO:0006355
Lele53g0317 277 Gene3D AP2/ERF domain 147 209 IPR036955 GO:0003700|GO:0006355
Lele53g0317 277 SUPERFAMILY DNA-binding domain 148 208 IPR016177 GO:0003677
Lele53g0317 277 PRINTS Ethylene responsive element binding protein signature 172 188 IPR001471 GO:0003700|GO:0006355
Lele53g0317 277 PRINTS Ethylene responsive element binding protein signature 149 160 IPR001471 GO:0003700|GO:0006355
Lele53g0317 277 PANTHER DNA-BINDING DOMAIN 134 246 IPR044808 GO:0003700|GO:0009873
Lele53g0317 277 Pfam AP2 domain 148 198 IPR001471 GO:0003700|GO:0006355
Lele53g0317 277 ProSiteProfiles AP2/ERF domain profile. 148 206 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0317 Lele-ChrLele53 2679111 2679944 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0317 1 219 AP2-EREBP Transcription Factor Family AT4G17500 58.772 2.83e-82 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele53g0317 AP2 1.2e-14 CL0081