Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0313 ATGATATCGTTGCAGATCAGTTCAGCTATTCCATTGTACAACGCTCGTGGGTTTCAGGTCAGACGTGCTAGCTTCCGATGCCAAGCTTCTCCATTAAATCCTTCCACGAAACCATCGCTGCCGTCTTCCACCGAGTCCACTCGATTGCACATAGCAAACCTCGACATGCTCCTCCAGAAGCAATCGCCTCCTACTATCACCCAATTTGAACAACAACAACAACCAAAGCCTCTTCAGAAGGAAACTGAAAACGAAAAGAGATCGAAGAACATAGTCGAAGGTCTGAGTTTAGCTAGGCTATGGCCAGAAATGAAAGCCACAGAAGAGATGTCTCCGAGGCATCTCAACCGCTTACAGCGTCTGTTATCGAAGACGATGGAGTATTCCCCTCGGAACATTCTCGGGAGCCGGTGGAGGGAATATCACGGAAGTAACGATTGGAAAGGACTCCTAGATCCGCTCGACGAGAATCTCCGGCGAGAGGTTGTCCGGTACGGCGAGTTCGTACAAGCCGCTTACCATTCGTTTAACACCGATCCCGCCATGTCACCGGAGGAGCCGCCCACGCCCCAACGGATCGTTTTGTCGGATAGGTCCCACAAAGTTACCAAGAGCCTCTATGCCACGTCATCAATCGGGTTGCCCAAATGGGTTGACGACGTGGCTCCGGATCTCGGATGGATGACCCAGCGATCGAGTTGGATCGGGTACGTCGCCGTTTGCGATGATCGGAGAGAGATCGCCAGGATGGGACGGAGGGACATCGTAATATCTCTTCGTGGGACAGCGACGTGCCTGGAATGGGCCGAGAATACCCGGGCCCAACTAACTGATATGCTTCCAAAGATTGGTGATGACTCAGCTACGGCCCATGAAAAGCCCAAAGTGGAGTGTGGGTTCTTGAGCCTGTACAAGACCCCAGGGGCTCACGTGCCAAGCCTAGCCAAGTCTGTGATAGAAGAAGTGAAAAGGCTCATGGAAGTATACAAAGGCGAGACACTCAGCATCACGGTAACTGGCCATAGCCTCGGTGCCGCGCTGGCGTTGCTCGTGGCTGATGAGATCAGCACTTGCGGCGCTGATGTGCCACCGGTGGCAGTAATCTCCTTCGGTGGGCCTCGAGTGGGAAATAAGGCCTTCAAGGATCGATTAGCATCCCAAAATGTAAAAGTATTAAGAATAGTGAACTCTCAAGATGTGATTACTAGGGTTCCGGGGATGTTCATGAGTGAAGAAGTCAAACAAAAACTAAGCAGTTCCAAGATAGGAGAAACGATAGAGAACATGGGGTTTGGATATACGCACGTGGGAGTAGAGCTGCTCGTAGATTCGAAGATGTCGCCGTATCTGAAGCCTGATGCTGACATGGCATGTTGCCATGACCTAGAGGCTTATTTGCACCTGGTGGATGGGTATTTGGCATCAAATTGTCCGTTCAGATCAAATGCCAAGAGGAGCTTGCGAAGATTAATGCAAGATCAAACATCCAATATGAAGAAATTATATACTAGCAAGGCAAAAGCCTTGAGTGTAAACCTTGTGAAACAAGGCTCTTTCTCTATGCCTAGTTCATCTTAA 1578 0.5006 MISLQISSAIPLYNARGFQVRRASFRCQASPLNPSTKPSLPSSTESTRLHIANLDMLLQKQSPPTITQFEQQQQPKPLQKETENEKRSKNIVEGLSLARLWPEMKATEEMSPRHLNRLQRLLSKTMEYSPRNILGSRWREYHGSNDWKGLLDPLDENLRREVVRYGEFVQAAYHSFNTDPAMSPEEPPTPQRIVLSDRSHKVTKSLYATSSIGLPKWVDDVAPDLGWMTQRSSWIGYVAVCDDRREIARMGRRDIVISLRGTATCLEWAENTRAQLTDMLPKIGDDSATAHEKPKVECGFLSLYKTPGAHVPSLAKSVIEEVKRLMEVYKGETLSITVTGHSLGAALALLVADEISTCGADVPPVAVISFGGPRVGNKAFKDRLASQNVKVLRIVNSQDVITRVPGMFMSEEVKQKLSSSKIGETIENMGFGYTHVGVELLVDSKMSPYLKPDADMACCHDLEAYLHLVDGYLASNCPFRSNAKRSLRRLMQDQTSNMKKLYTSKAKALSVNLVKQGSFSMPSSS 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0313 525 MobiDBLite consensus disorder prediction 67 88 - -
Lele53g0313 525 CDD Lipase_3 158 470 - -
Lele53g0313 525 SUPERFAMILY alpha/beta-Hydrolases 229 471 IPR029058 -
Lele53g0313 525 Pfam Lipase (class 3) 256 407 IPR002921 GO:0006629
Lele53g0313 525 Gene3D alpha/beta hydrolase 137 521 IPR029058 -
Lele53g0313 525 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 46 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0313 Lele-ChrLele53 2624880 2626457 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0313 14 525 Acyl Lipid Metabolism Gene Families AT4G16820 56.023 0.0 542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g0313 53 2624880 2626457 Lele49g0476 49 2841410 2843437 CCT
Lele53g0313 53 2624880 2626457 Lele50g0508 50 3020865 3025865 CCT
Lele53g0313 53 2624880 2626457 Lele51g0492 51 2888962 2896415 CCT
Lele53g0313 53 2624880 2626457 Lele52g0509 52 3092844 3097837 CCT
Lele53g0313 53 2624880 2626457 Lele55g1177 55 18403073 18404653 hybridization
Lele53g0313 53 2624880 2626457 Lele56g1127 56 14763932 14765512 hybridization