Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0307 ATGGGATCTCTTGTCGCCGTCCCAGTTCTCGACGCTCCGACCTCCTCCGAGTCCGAAATGGCCTGGCACTTTGCGTCTCTTCTTCTATCCCTCGGCCATCCAGCTCATCCCGCCGACCTCGCTTCTCCATGCACTTTATTCACCGCTTCTCCTGAGCTAGTTGAGTTCCTCTGCTCGATCCCCGGATCTCCCATCTTGTTGACCTCCGATTTCTATGTCAGTCTCTCTGCTGTTGCCATAGTCGCTGTTGGACGCTTCGTCTCGGTGACCCATTCTTTTGGTAGTTCTTTTATAGCTAGATTTGGAATCAGAATTTCCTCGACGGACGGTTGGGGGAATGGCAGTAGAAAACGGAAACGTAGGTTTATTTTAGATTCTGATTTTCTTCCCGTAGCAAAAAGAGGGATAAATTATTATTCTGAACATGTAGATGAGTTGGAACCCTTGAAGTTGCTTCCTCCGAAGAGAATCAGTGATGATTCTTCAAAGATTATTTTACAGTCACATGGCACTGTAAGCATTGAATTATTCGAAAGTCCAGATCAGTGCAAGGAAGTTAAAATGGAGGAGACTTCCGGGAGTAGGACAAATGTCAATGACCCATTAAAAGATCTTAAATCTACCGATATGCCTCCGTTGGTCGATGACAGGATTAATGACAATAAAGTAGCTCCGAAAATTATAGTAGGTGATAGCAAAGTATCCTTGGAATGCAAGCAGACGTCGATGAGTTCCGATAACATGAAACCTCTCCAAATCATTGTACAGCCATCAAATACTACTGTTTTAGAAATGCCGCCCAAAGGTGACATTGGAAGGATTCATGATGAAAAATGCAATGAATTTAACCATTTGAGTTGTAAGTCAATGGCTGCAGATATGAAAAGTATGGACTTTTCTATGGGTCCCCTTTCGTTACGGAATTTTCCTCAATCCTCTTTGAAGAAGAACGCCACGCCCAGCGATGCAACTGTTCCTAAACTGCAAAACATGTCCAAACGTTTGCATAATGAAGAGGAAAGGAACTTTAGTAGAGGTCAGGCATCAATGGGTAAGAGAGAGAAAAAGAATTGCACTTCCATTCATATCAAGGAAAAAAGGGGGACTTCGATCTCAACGTGTCCTGAGGATCAAAAGGAGTGTAAAGAGCTTCCAACATTTGAATCGTACATTGTAGAAGAGGAAGAAGGCGCAGGCCCTCAAGCTAAAGCTCACGGGCAATATGTTACGAATGAGCTGAAAGTGTTGGAGCGATTTGGAGGCAAAAATTTTATCATTAAATATGAAGGCAGCTTCAAGAATGGAAATACTGATTGCTTTGTTCTAGAACATATTGAGCACGACAGGCCTGAGGTGTTGAGGAAAGAAATTGATATTGTTAAACTCCGATGGTATGGTTACTGCATGTTCAGGGCTCTTGCAGCTCTTCACAAGCGGGAAGTAATACACAGAGATGTTAAACCTGCCAATTTCCTTTTCTCCCGTAAGCTTAAGAAAGGCTACCTTATTGATTTCAATCTTGCCAAGGATCTGCATCAGAAGCCAGGAAATATCACTTCAACCAAATGCAGAAAGTTCCCAAATGTCAATTTCTTGGAAACTGCCAATCAACAGACAACTAATGCCTCGAAGTCGATTTTAGATCCGAAAGACAACAGAAGGACAGTGGTGCAGTCAAAGACTAAAAATGACCGAAGTAGTGGGCAGGTATTGTTCAGGTCTCCTCATCAAGGACCAAAGCTTGACGTCTGGTCTGCCGGTGTATCGTTGCTCTATCTCATAATCGGAAAAGTTCCTTTCACCGGGGATCCTGAACAGAACATAAAGGATATAGCTAAACTTAGAGGCAGTGAAGATCTATGGGAAGTTGCTAAGCTACACAATCGGGAATCCTCATTCCCTGCGGTCTTATACGATAAACAAAGTATGCCATCTTTGCCACTTCGAGATTGGTGCTTAATGAACACAAAGAGACCAGAGTTTCTAGAAGTCATTCCCAGTTCACTGTTTGATCTTGTGGACAAGTGTTTGATGGTGAACCCTAGGGTGAGAATCGGTGCAGAGGAAGCTCTTCAGCATGAATTTTTTGCTCCATGCCATGAGAGCCTGAGGAAGGAGAGGCAATGTAAGAAGGAATTATTAGAGTTGAGCCCACCACATAATGTACATCACAAATCATTATTCGCTAACATAGTTCATGTTTCAGAGTAG 2211 0.4301 MGSLVAVPVLDAPTSSESEMAWHFASLLLSLGHPAHPADLASPCTLFTASPELVEFLCSIPGSPILLTSDFYVSLSAVAIVAVGRFVSVTHSFGSSFIARFGIRISSTDGWGNGSRKRKRRFILDSDFLPVAKRGINYYSEHVDELEPLKLLPPKRISDDSSKIILQSHGTVSIELFESPDQCKEVKMEETSGSRTNVNDPLKDLKSTDMPPLVDDRINDNKVAPKIIVGDSKVSLECKQTSMSSDNMKPLQIIVQPSNTTVLEMPPKGDIGRIHDEKCNEFNHLSCKSMAADMKSMDFSMGPLSLRNFPQSSLKKNATPSDATVPKLQNMSKRLHNEEERNFSRGQASMGKREKKNCTSIHIKEKRGTSISTCPEDQKECKELPTFESYIVEEEEGAGPQAKAHGQYVTNELKVLERFGGKNFIIKYEGSFKNGNTDCFVLEHIEHDRPEVLRKEIDIVKLRWYGYCMFRALAALHKREVIHRDVKPANFLFSRKLKKGYLIDFNLAKDLHQKPGNITSTKCRKFPNVNFLETANQQTTNASKSILDPKDNRRTVVQSKTKNDRSSGQVLFRSPHQGPKLDVWSAGVSLLYLIIGKVPFTGDPEQNIKDIAKLRGSEDLWEVAKLHNRESSFPAVLYDKQSMPSLPLRDWCLMNTKRPEFLEVIPSSLFDLVDKCLMVNPRVRIGAEEALQHEFFAPCHESLRKERQCKKELLELSPPHNVHHKSLFANIVHVSE 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0307 736 MobiDBLite consensus disorder prediction 187 217 - -
Lele53g0307 736 Gene3D Transferase(Phosphotransferase) domain 1 453 727 - -
Lele53g0307 736 ProSitePatterns Serine/Threonine protein kinases active-site signature. 481 493 IPR008271 GO:0004672|GO:0006468
Lele53g0307 736 ProSiteProfiles Protein kinase domain profile. 337 696 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele53g0307 736 SUPERFAMILY Protein kinase-like (PK-like) 407 704 IPR011009 -
Lele53g0307 736 Pfam Protein kinase domain 407 696 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele53g0307 736 PANTHER OVARIAN-SPECIFIC SERINE/THREONINE-PROTEIN KINASE LOK-RELATED 365 713 - -
Lele53g0307 736 SMART serkin_6 390 696 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele53g0307 736 FunFam Kinase like protein 445 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0307 Lele-ChrLele53 2584153 2589686 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0307 393 696 Core Cell Cycle Gene Families AT3G48750 24.367 4.05e-12 65.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-2 Lele53g0307 Pkinase 3.2e-29 CL0016