Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0302 ATGTCGTCCTGCTCGTCGGAGAACTCGGAGATTTCTGACGTGAAGCCGGCGGCCAAGTCGTCGGAGCAGTCAGCTTTCTCTCAGACTTGTAGCCTGTTGAGTCAGTACCTCAAGGAAAATGGCAGCTTCGGAGATCTTAATCTCGGAATGAAATGCAACATCAAAGGAACTGGGTATCATGAGACATCTTGTCACTCTGCAACAATGAAGAACCTTCTTCCGACCAAGACTCCTGTGAATCCCACTGTGATGATGAATTCTGTGAGTATGGATCCCAAATCTGCTCAGTTGACAATCTTTTATGGTGGACAAGTTCTTGTGTTTGATGATCTACCAATTGCTAGGAAAGCTTCACTTCATCGGTTCTTAGAGAAGAGAAGGGATAGGTAG 390 0.459 MSSCSSENSEISDVKPAAKSSEQSAFSQTCSLLSQYLKENGSFGDLNLGMKCNIKGTGYHETSCHSATMKNLLPTKTPVNPTVMMNSVSMDPKSAQLTIFYGGQVLVFDDLPIARKASLHRFLEKRRDR 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0302 129 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 19 112 IPR040390 -
Lele53g0302 129 ProSiteProfiles Tify domain profile. 90 125 IPR010399 -
Lele53g0302 129 SMART tify_2 90 125 IPR010399 -
Lele53g0302 129 Pfam tify domain 92 112 IPR010399 -
Lele53g0302 129 MobiDBLite consensus disorder prediction 1 23 - -
Lele53g0302 129 Pfam Jas motif 112 129 IPR018467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0302 Lele-ChrLele53 2526402 2527703 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0302 110 129 Tify Gene Family AT1G74950 85.000 3.03e-06 42.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Lele53g0302 tify 1.1e-10 No_clan