Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0293 ATGAAAGCCATCGGCGCCTCCATGCGAGAGATTGCACTTCCTTCTTCTGTTTTGTATTTCCTTTTGTCCAAGGGTACCGGATTTGTTGGGATGGACGATGATGGGTTGAATTTTAATGCGAATAAAATTTCAACCCGAAACAGAAGTTGGGGGCACTGTAATGCCGGGCCCTGGAGCCAGAAAATGAATTGTTTCTTCTTCAAAAAGAAATTTAATAGCAGGGGAGAATCAAAATCGGCGCCGGAATTGCAAAATGAGAGGCAGCGGAATAACCCGGCGGTGAACCGGGTTTGCAAGTCGACGAGTTCGATACCGTCGCCGAGGAGCTTGACGGAGTTGTACAAAGAGAAAGCCAAAGAGAACAATTTCAGAGTTTTTAGTTTGGAAGAGCTTCTAGAAGCAACAAAGGGGTTCAATAGGATGCTCAAGATTGGTGAAGGTGGCTTTGGTAGCGTGTATAAAGGTACGATTAGGCCTCCCGGTGGACGAGGCGATCCAATCGTCGTGGCCATAAAAAAGCTCAACAAGCATGGATTTCAGGGTCACAAAGAATGGCTTGCTGAAGTTCAATTTCTTGGCGTTGTAAATCATCCAAATCTGGTAAAACTTCTGGGATACTGCTCCGTTGATGGAGAAAGAGGAATCCAACGGTTGTTAGTGTATGAGTATATGGCAAATAGAAGCCTAGAACATCATCTTTTTAATCCTTCTATTCCTACCTTGCCTTGGAAAAGACGATTGCAGATCATGATCGGTGCTGCACAAGGATTGACTTATTTGCATGAAGGATTGGAATTTCAGGTGATATACCGAGATTTCAAAACTTCAAATGTTCTATTGGATAAGGATTTCCAACCAAAGCTCTCAGACTTTGGTCTTGCAAGGGAAGGCCCCCAAGGCGATAATACTCATGTATCTACTGCGGTGGTTGGAACACAAGGATATGCTGCCCCGGAGTATGTAGAAACAGGGCATCTCAAAGTTGAATGTGACATTTATAGTTTTGGAGTGGTACTGTATGAGATCATCACGGGGAGGCGAGCATTAGACAGAAACCGTCCGGCTGCAGAACAAAAACTTCTAAGTTGGGTTAAACAGTATCCTGCTGACACCGGCAGATTCAGCATGATTATAGACCCGCGTCTCAGAAACCACTTTTCTCCCGGCGCAGTTCGCAAAGTTGCCAAGTTGGCTGACGCCTGTACTAGTAAGAATCCTCGAGAAAGGCCAACTATGTCTCAGATAGTGGAGAGCTTGAAGGGAGCATTGCAGGTTTCAGAGACCTCTGATACTTCTCAGAATGAAACAGCCGAATCATCTCGATCTTCTCGGGCTCGAAGAGGTAAATAA 1350 0.4511 MKAIGASMREIALPSSVLYFLLSKGTGFVGMDDDGLNFNANKISTRNRSWGHCNAGPWSQKMNCFFFKKKFNSRGESKSAPELQNERQRNNPAVNRVCKSTSSIPSPRSLTELYKEKAKENNFRVFSLEELLEATKGFNRMLKIGEGGFGSVYKGTIRPPGGRGDPIVVAIKKLNKHGFQGHKEWLAEVQFLGVVNHPNLVKLLGYCSVDGERGIQRLLVYEYMANRSLEHHLFNPSIPTLPWKRRLQIMIGAAQGLTYLHEGLEFQVIYRDFKTSNVLLDKDFQPKLSDFGLAREGPQGDNTHVSTAVVGTQGYAAPEYVETGHLKVECDIYSFGVVLYEIITGRRALDRNRPAAEQKLLSWVKQYPADTGRFSMIIDPRLRNHFSPGAVRKVAKLADACTSKNPRERPTMSQIVESLKGALQVSETSDTSQNETAESSRSSRARRGK 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0293 449 ProSitePatterns Protein kinases ATP-binding region signature. 144 173 IPR017441 GO:0005524
Lele53g0293 449 SUPERFAMILY Protein kinase-like (PK-like) 116 419 IPR011009 -
Lele53g0293 449 ProSitePatterns Serine/Threonine protein kinases active-site signature. 268 280 IPR008271 GO:0004672|GO:0006468
Lele53g0293 449 Gene3D Phosphorylase Kinase; domain 1 110 223 - -
Lele53g0293 449 Pfam Protein tyrosine and serine/threonine kinase 143 419 IPR001245 GO:0004672|GO:0006468
Lele53g0293 449 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 224 434 - -
Lele53g0293 449 ProSiteProfiles Protein kinase domain profile. 138 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele53g0293 449 MobiDBLite consensus disorder prediction 76 105 - -
Lele53g0293 449 MobiDBLite consensus disorder prediction 423 449 - -
Lele53g0293 449 PANTHER OS01G0588500 PROTEIN-RELATED 91 421 - -
Lele53g0293 449 CDD STKc_IRAK 144 421 - -
Lele53g0293 449 MobiDBLite consensus disorder prediction 84 105 - -
Lele53g0293 449 Gene3D Transferase(Phosphotransferase) domain 1 224 447 - -
Lele53g0293 449 MobiDBLite consensus disorder prediction 423 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0293 Lele-ChrLele53 2449395 2455193 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0293 62 445 Glycoside Hydrolase AT3G07070 41.103 7.59e-93 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lele53g0293 PK_Tyr_Ser-Thr 4e-45 CL0016