Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0285 ATGCAATCTGTCATTTCTCATCTCTTTATCCTCCAACACCAGATTCTGAAGCCAAAACAGAAAGTCAGAGAGAGAAAACACAACAGAATGAAGAAGCTGGCCTTTCTGATTCTATTGATGATTTTGCTTGTATTTCAAGTCTCAAGTAGTGGCTCTGATCTCATTCATGAATCATGCAGAGACGTTTCCAAATCTGACCCAAGCATCCACTACGATTTCTGCGTTTCGAGCCTTCTTGAAGCCATTTCCAAGAAGCCACCAAGCAGATTCGAAGAGCTTGTTGCCATGACAATTCAGATAACCAAGATCAATGCCACCAACATGGTTTCCACAATCTCCAATCTCTTGAAGGATCCGATGATCAAGTTCAGTGATTATGCCAAGAAATGCTTACAAGATTGTTCTGAACTTTACTCAGATTCTCTTTCAGATTTGGTTGACGCCGTTGCAGCTTTCAAGTCTGAAGATTTCAACTCTGCAAGTACCAAGATAAGCGCAGTAATGAGTTCTTCTGTCACCTGTGAAGATCAATTCAAGGATGGGAATGAAATGTCTCCTTTAACAGACGACAAGAAAGCATACTTTGAGCTCAACGCAATGTCTTTGGCTTTCATCCAGAAGATGCAGAAATAG 633 0.4092 MQSVISHLFILQHQILKPKQKVRERKHNRMKKLAFLILLMILLVFQVSSSGSDLIHESCRDVSKSDPSIHYDFCVSSLLEAISKKPPSRFEELVAMTIQITKINATNMVSTISNLLKDPMIKFSDYAKKCLQDCSELYSDSLSDLVDAVAAFKSEDFNSASTKISAVMSSSVTCEDQFKDGNEMSPLTDDKKAYFELNAMSLAFIQKMQK 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0285 210 PANTHER PECTINESTERASE INHIBITOR-LIKE 36 204 - -
Lele53g0285 210 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 52 208 IPR035513 -
Lele53g0285 210 CDD PMEI-Pla_a_1_like 59 206 IPR034088 -
Lele53g0285 210 Pfam Plant invertase/pectin methylesterase inhibitor 53 203 IPR006501 GO:0004857
Lele53g0285 210 Gene3D Invertase/pectin methylesterase inhibitor family protein 50 208 IPR035513 -
Lele53g0285 210 FunFam Putative invertase inhibitor 50 208 - -
Lele53g0285 210 TIGRFAM PME_inhib: pectinesterase inhibitor domain 33 208 IPR006501 GO:0004857
Lele53g0285 210 SMART PMEI_2 50 204 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0285 Lele-ChrLele53 2342055 2342687 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g0285 53 2342055 2342687 Lele55g1204 55 18693054 18693578 hybridization
Lele53g0285 53 2342055 2342687 Lele56g1155 56 15031063 15031632 hybridization