Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0282 ATGCAAAATCAGTCAGTAATCGACGCTGCGTCGTGTTCCGATTGTTTTGTATCTTCTCGAGCATCCTATTACCCAAACTCCGATGAACATGGAACAGATGGTGCATGTGGGTTTGGTTCCTTTGGTGCTACCGTCAATGGCGGGGACGTCTCAGCTGCTTCTAATCTTTATCGTGACAGTCTCGGCTGTGGTGCCTGTTACCAGGTGAGGTGTAAGAACAGTGGTTATTGTTCAGATAATGGCGTGACTATAGTGATAACGGACCAAGGTTCGGGTCATGACACTGATTTCATTCTTAGCAAACGAGCCTTCACTCGCATGGCTCAGACCACTGATGCTGCTGCCACTTTGTTGGCTTATGGCGTCGTTGATATTGAATACAGAAGCTACCCATCCAAAAATATCACTATTAAGATACATGAGAGTAGCAGCAACCCCTATTACTTGGCCTTCGTCATAGAGTACCAACAAGGCAAGAGAGATATCACTGCTGTACAGCTCTGTGAGACTCATAATTTGGTGTGCAAGTTGCTGAGTAGGAGTTTTGGAGCAGTGTGGACTGTGAACAATCCTCCAAGTGGACCATTATCAGTGAGGATGTTGTTCAGTGATGATGATGGAGAAGACACGTGGCTCGTTCCTGTCAAGAACATTCCTCAAGACTGGAAAGCTGGAGAAGCCTACGATTCTGGGGTTCAAGTTAACCAATAG 711 0.4613 MQNQSVIDAASCSDCFVSSRASYYPNSDEHGTDGACGFGSFGATVNGGDVSAASNLYRDSLGCGACYQVRCKNSGYCSDNGVTIVITDQGSGHDTDFILSKRAFTRMAQTTDAAATLLAYGVVDIEYRSYPSKNITIKIHESSSNPYYLAFVIEYQQGKRDITAVQLCETHNLVCKLLSRSFGAVWTVNNPPSGPLSVRMLFSDDDGEDTWLVPVKNIPQDWKAGEAYDSGVQVNQ 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0282 236 SUPERFAMILY PHL pollen allergen 133 230 IPR036749 -
Lele53g0282 236 PANTHER EXPANSIN-B3 18 233 - -
Lele53g0282 236 Pfam Lytic transglycolase 53 127 IPR009009 -
Lele53g0282 236 Gene3D - 2 130 IPR036908 -
Lele53g0282 236 SUPERFAMILY Barwin-like endoglucanases 10 131 IPR036908 -
Lele53g0282 236 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 33 133 IPR007112 -
Lele53g0282 236 Pfam Expansin C-terminal domain 135 210 IPR007117 -
Lele53g0282 236 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 147 230 IPR007117 -
Lele53g0282 236 Gene3D - 131 234 IPR036749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0282 Lele-ChrLele53 2324035 2326314 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0282 13 232 Expansin Gene Family AT4G17030 43.805 2.02e-56 178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g0282 53 2324035 2326314 Lele55g1208 55 18710917 18713329 hybridization
Lele53g0282 53 2324035 2326314 Lele56g1157 56 15038441 15042369 hybridization