Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0263 ATGGGGCGTGGATTTTCCAAACTCTGTTCCTGCTTTGAACCTGTAAACCAGACGGCGACGGCCACAGCGACGAACCAACCGGACCAGCAGCAGTACAGGATTTCTGCCCCGACTGAGCATTTGGACGGAACTCTAGGCCACTCCTTCAGATATGTCAGATCTTCTGGTCGCTTTATTTCACCCGCTTACTCCGATCGCTTCGTCTCTCCTCCTTCTAACTCCCTCCGCTTCTCTCCCACCCGCGAACCCGTTATCAGAGCCCGATCCGATCATCCGGAAACTGGGTTCAGGGCCATTTCCGGAGCTTCGGTGAGTGCCAACAATTCGACTCCGAAAACTGTTCTCCAGATGAAAGATATCCACGATGAAGCCAATGATGATTCCGCTCATCAATGTGGCGTGAGGCGGAGTATTGTGAATGGGTTCGAAAGCACATCTTCGTTTAGAGCTCTTCCGCTTCAGCCGGCGCCGAGAGGGGAAGCTCACTTTCTCTCCGGTCCAATTGAGCGTAGTGCCCTCTCTGGGCCTCTTGAGATAAACAACGCCACCTCAGAAACTGGAAGCGAGGTCTCTTTTTCGGCTCCTCTGGGCGGCTTTTATACCAAAAATAAGCGGAAGAGCGCGTTTTCACAATTACGTAAGGCATTTCATCGGGCCATTTCGGAGAAGAAGCAGCCAGGGGTGTTGCCGGTGATGAAATTCGTGGGTAGAAAGGAAACTCCGTCGAACGAAGATAAGCCGGAGATGAAGAGTGAAATTCACTTACAGTGGGCGCTTTGGAAAGCGGGAGAGGATCGGGTACATGTGGTTGTGTCAGAAAAACACGGCTGGCTGTTCGTCGGGATTTACGACGGCTTCAATGGACCCGACGCTCCGGAATTCCTAATGTGCCATCTTTATCATGCTGTAGATAATGAACTAAAAGGTTTTTTGTGGGAAGAAGTTGAAGAAGATACACAGGAAACTGAAACTGAAACCTCAATGGGAAGAAAATCTCAGGAAGAGATCAAAACAGAGGGTGAAATTTCAGTATGTTCAGAAGATACGAATCCTCAGATGTTTCAGGCAGAAGGAACTGAAAGTAGACGACGCAGGCTATGGGAATTTCTTGCAGAGGAAGACGATCGTGCAGATGGTATTGATCTTTCAGGCTCAGAAAGATTTGAATTTTCCGTCCATGACGAAATCAACGCAGGCTCAGCAGTTAGTAGACGGTGGCCATTACCAAAACATAAGAGGGTCCACGGTGGTGGTAAGTTTTCACCACCGTCGACAGAATATCATAAAGAGAAGGTTGACGCAGAAAAAGTCAAGTATTTTGGTGGAGGAAGGAAGAGAAAGGTGGGCCCCGTAGATCATGATTCAGTGTTGAGGGCATTGTCGCTGGCTCTTGAAGCCACCGAAGCTGCATATTTGGAGATGACAGAGAAGCTTCTTGATTCAAACCCAGAACTTGCTTTAATGGGGTCGTGTGTTTTAGTTGTTTTGATGAGGGACGAGGATGTTTACGTGATGAACGTGGGAGATAGCAGAGCCATTGTCGCAGAATATAAGCCCAGAGAGTTGAAATTGAGATGTGAGGTAAATAATGAATCAATCAAGTTGGAGAATGAGGATTCTGGTCAAGAAATGAAGTTAGTTGCATTGCAGCTTTCCACCGACCATAGTACCAGCATTGAAGAGGAAGTGATAAGAATTAAGAATGAACATCCTGATGATAGCCACTGCATTGTGAAGGGTAGAGTGAAGGGTCGTCTTCAGGTGACAAGAGCATTTGGGGCGGGATTTTTGAAACAGCCCAAGTTGAATGATGCAGTGCTCGAAATGTTTCGTAATGATTATATAGGCACTGCTCCATATATTTCATGCTCTCCTTCGCTCTGCCATCATAGATTAAGCCCCGGAGATCAGTTCTTGATCCTCTCATCTGATGGCTTATATCAATATTTAACAAATCAAGAAGTGATTTCTCAGGTTGAGAACTTTATGGACAAGTTTCCAGATGGAGATCCTGCCCAGCATTTGATCGAGCAGCTACTCCTCCGTGCTGCTGACAAGGCGGGAATGGATGTGCGAGAGTTGCTGGATATTCCGCAAGGTGATAGAAGGAAGTACCATGACGATGTAACTGTCATGGTGATATCACTGGAAGGAAGGATCTGGAAATCATCGGGCAAGTACCTGTGA 2187 0.4719 MGRGFSKLCSCFEPVNQTATATATNQPDQQQYRISAPTEHLDGTLGHSFRYVRSSGRFISPAYSDRFVSPPSNSLRFSPTREPVIRARSDHPETGFRAISGASVSANNSTPKTVLQMKDIHDEANDDSAHQCGVRRSIVNGFESTSSFRALPLQPAPRGEAHFLSGPIERSALSGPLEINNATSETGSEVSFSAPLGGFYTKNKRKSAFSQLRKAFHRAISEKKQPGVLPVMKFVGRKETPSNEDKPEMKSEIHLQWALWKAGEDRVHVVVSEKHGWLFVGIYDGFNGPDAPEFLMCHLYHAVDNELKGFLWEEVEEDTQETETETSMGRKSQEEIKTEGEISVCSEDTNPQMFQAEGTESRRRRLWEFLAEEDDRADGIDLSGSERFEFSVHDEINAGSAVSRRWPLPKHKRVHGGGKFSPPSTEYHKEKVDAEKVKYFGGGRKRKVGPVDHDSVLRALSLALEATEAAYLEMTEKLLDSNPELALMGSCVLVVLMRDEDVYVMNVGDSRAIVAEYKPRELKLRCEVNNESIKLENEDSGQEMKLVALQLSTDHSTSIEEEVIRIKNEHPDDSHCIVKGRVKGRLQVTRAFGAGFLKQPKLNDAVLEMFRNDYIGTAPYISCSPSLCHHRLSPGDQFLILSSDGLYQYLTNQEVISQVENFMDKFPDGDPAQHLIEQLLLRAADKAGMDVRELLDIPQGDRRKYHDDVTVMVISLEGRIWKSSGKYL 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0263 728 MobiDBLite consensus disorder prediction 323 340 - -
Lele53g0263 728 CDD PP2Cc 452 716 IPR001932 -
Lele53g0263 728 ProSiteProfiles PPM-type phosphatase domain profile. 249 716 IPR001932 -
Lele53g0263 728 PANTHER PROTEIN PHOSPHATASE 2C 247 715 IPR015655 GO:0004722|GO:0006470
Lele53g0263 728 FunFam Protein phosphatase 2C 29 341 723 - -
Lele53g0263 728 Gene3D - 234 723 IPR036457 -
Lele53g0263 728 SMART PP2C_4 246 714 IPR001932 -
Lele53g0263 728 Pfam Protein phosphatase 2C 469 683 IPR001932 -
Lele53g0263 728 MobiDBLite consensus disorder prediction 319 340 - -
Lele53g0263 728 SUPERFAMILY PP2C-like 262 717 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0263 Lele-ChrLele53 2173645 2176742 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0263 1 728 PP2C-type Phosphatase Gene Family AT2G35350 53.701 0.0 710