Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0256 ATGGCTGAGAAGTCCAGAAGACCTGATGAGGAGTTCAAAGTGCTTGGGCAAAGCACCATCAATCAAAATTTGGATGTGTACGTATGGGACATGGACGAGACCCTTATACTGCTTAACTCTTTGCTGAAGGAGTCCTATGCAGAGGCTTTTAGTGGCTTGAAGGATGTCCAGAAGGGTGTGGAGATTGGGAGGATGTGGGAAAAGCTCATTCTGCAATTATGTGATGATTATTTCTTCTATGAGCAAATAGAAAATTACAATAAGCCATTTCTTGATATTTTGAGCCCATATGATGATGGAAGGGACCTCGCTAATTATGACTTCAACCAAGATGGTTTAGGTTCTTCCCATGGTGATGATGATGACAACAAAAGAAAGCTTGCATATAGGCTTCGAGTTATAGCCCAAAACGTGAATTGTTGGAACGGTTTAAAGCATCTCTTGGACCAAGAGACAGTTACCCTCTGGGATCAATTGTATGAGATAACTGATGCATATACTGATAGATGGCTTTCCTCAGCACGGGCATTTCTGAAGGAGTGTTTGGGTGAAAATAAGGTTGAGGATTCCTCTGTTGCGCTTCCTGAGACCAGTGCTGACTCAACCAATATGACACGCCAGCGTGTTAACGTTTTAGTGACATCTGGATCACTGATACCGACCCTTGTAAAATGCATGCTCTTCCGTATGGACGGCCTGATAACTCGTGAAAATCGTGAGTCCAATTTTCTTGTGTTTGACTACCATGTCTCAGAATGGACTTCTCATGCCAAAATGATTACAATTCTTAATAATTCAACACATTTCGTTGCAGTTTATAGCTCATGGGACGTGGGGAAAGTTCAGTGCTTCCGATGGATCAAGGAGCGTTTTGACCATCCCAATGTCCGTTTTTGTGTGATTGGAGATGGATGGGAAGAATGTGAAGCGGCAAAAACCATGAGCTGGCCATTTGTGAAGATTGATCCACGGCCAGGCACACCATACAGGTTTCCTGGGCTCACCTTAAGAACAGTGAGCCACTACTTTTCTGTGGTGTATGGAAGTCTGAATAATGAGAACGATGATGAAAAATAA 1077 0.4299 MAEKSRRPDEEFKVLGQSTINQNLDVYVWDMDETLILLNSLLKESYAEAFSGLKDVQKGVEIGRMWEKLILQLCDDYFFYEQIENYNKPFLDILSPYDDGRDLANYDFNQDGLGSSHGDDDDNKRKLAYRLRVIAQNVNCWNGLKHLLDQETVTLWDQLYEITDAYTDRWLSSARAFLKECLGENKVEDSSVALPETSADSTNMTRQRVNVLVTSGSLIPTLVKCMLFRMDGLITRENRESNFLVFDYHVSEWTSHAKMITILNNSTHFVAVYSSWDVGKVQCFRWIKERFDHPNVRFCVIGDGWEECEAAKTMSWPFVKIDPRPGTPYRFPGLTLRTVSHYFSVVYGSLNNENDDEK 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0256 358 SUPERFAMILY HAD-like 23 328 IPR036412 -
Lele53g0256 358 Gene3D - 254 327 IPR038102 -
Lele53g0256 358 Gene3D - 25 239 IPR038102 -
Lele53g0256 358 PANTHER EYES ABSENT 263 343 IPR028472 GO:0004725
Lele53g0256 358 TIGRFAM EYA-cons_domain: EYA conserved domain 25 243 IPR006545 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0256 Lele-ChrLele53 2125729 2127389 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0256 24 357 Protein tyrosine phosphatase (PTP) family AT2G35320 52.096 2.49e-120 348
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g0256 53 2125729 2127389 Lele55g1230 55 18874788 18876450 hybridization
Lele53g0256 53 2125729 2127389 Lele56g1177 56 15228691 15230359 hybridization