Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0251 ATGGCTGGTCTGGATTTAGGCACTACTTCTCGCTTTGTTCCAAATCTCCACAGACCTAACTTGCACCTCCCTCAGCAGCAGCGGCTGCAACACGATTCCGAAGAAGATGCGCATCGGCCCGATCCCTTTCCGGGCGACGACGGTCCCCACCAAGGCCTTGAGCTCGCATCCACCGGGCCTGGCGACATCGTGGGCCGTCGACCCCGCGGAAGGCCACCGGGCTCCAAGAACAAGCCCAGACCACCGGTCATAATAACCAGAGAGAGTGCCAACACCCTCCGAGCTCATATTCTCGAAGTCGGCAACGGTTGCGACGTGTTCGACTGCGTCGCCACTTACGCTCGCCGGAGGCAGCGTGGGATCTGTATTCTAAGCGGAAGTGGCACGGTGACGAATGTGACCCTAAGGCAACCTGGAGGTGCTGGAGCTGTAGTGAGTCTTCACGGGAGGTTTGAGATATTGTCGTTGTCGGGATCGTTCCTACCGCCTCCGGCGCCGCCCGGTGCGACCAGTCTTACGATATACTTAGGCGGAGGGCAAGGGCAAGTGGTCGGAGGAAGCGTGGTGGGAGAGCTGAGGGCGGCGGGTCCGGTGATCGTGATCGCTTCTTCGTTCACGAACGTGGCGTACGAGAGACTTCCGTTGGACGAGGAGGAGCAGGAGCAGCTTCAGATGCAGACACCTGGCTCCGGTCATGGCGGTTCAGGTGGCGGAGGTGGGAATAACTCGTATCCTGAGGCATCTTCCGGGCTACCTTTCTTCAATTTGCCGCTTAATATGCCGCAGCAGCAGCAGCACAATGTTCAGTTGCCGGTCGACGGCTGGACCGGAAACTCCGGTCCGGGTCCATCCTTTTAA 858 0.5932 MAGLDLGTTSRFVPNLHRPNLHLPQQQRLQHDSEEDAHRPDPFPGDDGPHQGLELASTGPGDIVGRRPRGRPPGSKNKPRPPVIITRESANTLRAHILEVGNGCDVFDCVATYARRRQRGICILSGSGTVTNVTLRQPGGAGAVVSLHGRFEILSLSGSFLPPPAPPGATSLTIYLGGGQGQVVGGSVVGELRAAGPVIVIASSFTNVAYERLPLDEEEQEQLQMQTPGSGHGGSGGGGGNNSYPEASSGLPFFNLPLNMPQQQQHNVQLPVDGWTGNSGPGPSF 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0251 285 Gene3D - 93 230 - -
Lele53g0251 285 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 32 246 IPR014476 GO:0003680
Lele53g0251 285 FunFam AT-hook motif nuclear-localized protein 93 220 - -
Lele53g0251 285 Pfam Plants and Prokaryotes Conserved (PCC) domain 94 207 IPR005175 -
Lele53g0251 285 PIRSF ESCAROLA 7 285 IPR014476 GO:0003680
Lele53g0251 285 ProSiteProfiles PPC domain profile profile. 90 226 IPR005175 -
Lele53g0251 285 MobiDBLite consensus disorder prediction 241 285 - -
Lele53g0251 285 SUPERFAMILY AF0104/ALDC/Ptd012-like 90 224 - -
Lele53g0251 285 CDD DUF296 94 169 IPR005175 -
Lele53g0251 285 MobiDBLite consensus disorder prediction 218 285 - -
Lele53g0251 285 MobiDBLite consensus disorder prediction 1 84 - -
Lele53g0251 285 MobiDBLite consensus disorder prediction 28 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0251 Lele-ChrLele53 2089810 2090667 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0251 1 280 AT-hook Motif Nuclear Localized (AHL) Family AT4G17800 66.340 2.47e-99 291