Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0244 ATGGAATCGATGGAGGAATCATGGGAAAGCTTGTTCCAGGATTTGGAAATAGCTGGTGATTTCAGTTTTGCTTTTGGTGAGGCTCATGAATTAGGCAGGGAATCACATGAGAACTTAGAAAGTTGTTGGAATAACACTGAAAATGGCATCATCACGAGCAATCCTTCGACTTCATCAAAATATGTCAACAGCCAACATCTCACGTTTTCCCATGATTCTGTCTTGATGCTACATGACAAGGCTTATTATTCTGATGATCCTTCAAATGGGTACTTGCAGAGTCAAACAAATAGTATTACAGAAAGAGACAAACCAGAGGGTAGAAATTCTCGAGTACAAGATCACTTACTTGCCGAGAGAACAAGGAGAGGAAAGATCTCCCAGCACTTCATTTCCCTTTCTGCCCTAATTCCTGGCCTCAAAAGGGCGGACAAGGCGTCTGTGCTTGAGGGAGCTATAAAGCACGTGAAGCAGCTTCAAGAACAAGTGAAAACCCTGGAAGAAGAACATACCAATAAGAAGAGGAAGACTGGAGAATCTGTGGTGAAGACAATCAAAGAGATTGAAAAACTCCACTTGTCTGTGGTAAATAGCAGTGTGATGCCTTTTGGAAGATCCATTCTCGACATCACCATCATCGCTGAGGTATTACGTTTTGTCATTAATGCATAA 672 0.4182 MESMEESWESLFQDLEIAGDFSFAFGEAHELGRESHENLESCWNNTENGIITSNPSTSSKYVNSQHLTFSHDSVLMLHDKAYYSDDPSNGYLQSQTNSITERDKPEGRNSRVQDHLLAERTRRGKISQHFISLSALIPGLKRADKASVLEGAIKHVKQLQEQVKTLEEEHTNKKRKTGESVVKTIKEIEKLHLSVVNSSVMPFGRSILDITIIAEVLRFVINA 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0244 223 MobiDBLite consensus disorder prediction 86 111 - -
Lele53g0244 223 Gene3D - 107 193 IPR036638 GO:0046983
Lele53g0244 223 Pfam Helix-loop-helix DNA-binding domain 113 160 IPR011598 GO:0046983
Lele53g0244 223 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 110 159 IPR011598 GO:0046983
Lele53g0244 223 Coils Coil 149 176 - -
Lele53g0244 223 PANTHER BHLH TRANSCRIPTION FACTOR 174 216 - -
Lele53g0244 223 SMART finulus 116 165 IPR011598 GO:0046983
Lele53g0244 223 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 107 172 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0244 Lele-ChrLele53 2028600 2029457 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0244 100 215 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 38.953 1.25e-22 92.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele53g0244 HLH 1.4e-08 No_clan