Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0241 ATGTCTGAGTACCGTGCACTTCTTTCCCTGAAAGCAGCCATTACCGACGACCCTCACTCTTCTCTCTCCTCCTGGAACGCCTCCACCAGTCACTGTACCTGGTCTGGTGTCACCTGCGACTTCCGCCGCCACGTCATATCTCTTAACTTAACCAGCCTTGAGCTCTCCGGCTCAGTCTCCAATGATATTGCGCACCTCCCATTTCTCACTAATCTCTCCGTAGGTGACAATCAGCTCTCCGGACCCATCCCTCCGGGCATTTCTGTTGTCACTAGCCTACGATTCCTCAACCTTTCTAACAATGTGTTTAACGGAACTTTCCCTGCTCAGCTTTCCGAGCTAAAGAATCTTCAGGTCCTCGACCTTTATAACAACAACATGACCGGAGACCTTCCGCTCGTTGTGACCCAGATGCCGAATCTCCGGCATTTGCATCTCGGAGGGAACTTTTTCTCGGGTCAGATCCCGTCGGAGTATGGCCGGTGGGAACACTTGGAATATTTGGCTGTTTCCGGTAATGAACTAGCGGGCACTATACCACCGGAGATCGGCAACTTGACGAAGCTCCGGGAGCTTTACATTGGATATTACAACACTTACGACGGCGGTTTACCACCAGAGATTGGCAATTTGTCGGAATTAGTCAGGTTCGACGCGGCAAACTGTGGATTAACAGGCGAGATTCCTCCGGAAATCGTGAAGCTTCAGAAACTCGATACACTGTTTCTTCAAGTGAATGCGCTTTCGGGGCCTTTGACACCTGAGCTTGGGAGCTTGAAGAGTTTAAAATCAATGGATTTGTCCAACAATATGCTTGCCGGTGAGATTCCGGAGAGTTTTGCTGAGCTTAAGAACATGACTCTTTTGAACCTGTTCAGAAACAAGCTTCATGGAGCTATTCCTGAGTTCATCGGTGAACTACCTTCCTTGGAGGTATTACAGCTTTGGGAGAATAACTTCACTGGGAGCATTCCTCAGGGTCTGGGGCAGAATGGGAGGCTTGTTCTTGTTGATCTTTCGTCTAACAAAATAACCGGTTCTTTGCCTCCTAATATGTGCAATGGGAATCAGCTTCAGACTCTAATAACTCTTGGAAATTTCTTGTTTGGTCCTATCCCTGAATCTCTCGGGAAGTGCGAGTCATTAACACGAATTCGTATGGGAGAGAACTTTCTGAATGGTTCAATTCCTAAAGGCCTCTTTGGGCTTCCCAAACTTTCACAGGTTGAACTTCAAGACAATCTTCTCTCCGGGCAATTTCCTGAGGGGGCTTCCTTTTCTGTTAATCTTGGTCAGATTAGTCTATCCAACAACAATCTTTCTGGGCCGTTGCCACCTACTATAGGTAACTTTTCCGGCATGCAAAAGCTCCTTCTGGACGGTAACAAATTCTCAGGTCAAATACCTCCTCAGATTGGGAGATTACAGCAGCTTTCGAAGGTAGATTTTAGCCACAACAAGTTCTCGGGCCCTATCGCCCCAGAAATCAGTAAATGCAAGTTACTGACATTCGTTGATCTTAGTCGTAACGAGCTTTCTGGTGAGATTCCAAACGAATTAACCGGTATGCGGATTCTCAATTATTTGAATCTCTCTAGAAATCATCTTGTTGGCAGCATTCCCTCATCGATATCAAGCATGCAAAGTTTAACCTCTGTTGATTTTTCATATAACAATCTGTCCGGTTTGGTTCCTGGCACTGGCCAATTCAGTTACTTCAACTACACATCTTTCCTCGGCAACCCTGAACTCTGTGGTCCTTATTTGGGTCGTTGCAAGGGTGGTGTTTCTAATGGTGCTCACCCACCTCATGTTAAAGGTCCATTGTCTTCTTCCTTGAAACTTCTCCTGGTTCTTGGGTTGCTATTATGCTCGATTGCATTTGCAGTTGCGGCAATAATTAAAGCACGATCATTGAAGAAGGCAAGTGAAGCTCGTGCATGGAAGTTAACAGCATTCCAGCGTTTGGATTTCACTGCGGATGATGTTTTAGATTGCTTGAAGGAGGACAATATAATAGGTAAAGGAGGTGCAGGAATTGTGTACAAGGGTGCTATGCCTAATGGTGATCAAGTTGCTGTAAAAAGGTTGCCGGCCATGAGTAGAGGATCTTCCCATGATCATGGTTTCAATGCAGAGATCCAGACGTTGGGGAGAATCCGACACAGACACATTGTTAGGTTGTTGGGTTTCTGTTCAAACCATGAAACTAATCTTTTGGTGTATGAATACATGCCCAATGGAAGCCTAGGTGAAGTTCTTCATGGTAAAAAAGGTGGTTACCTGCATTGGGACACGAGGTATAAAGTTGCTGTGGAGGCTGCAAAGGGGCTGTGTTATCTACACCATGACTGTTCCCCTCTTATTGTTCATCGAGATGTGAAGTCGAACAATATCCTTCTTGACTCTAACTTCGAAGCGCATGTTGCTGATTTTGGGCTTGCCAAGTTTCTGCAAGATTCTGGAACATCTGAATGCATGTCTGCTATCGCCGGTTCATATGGATACATAGCACCAGAATATGCCTACACCCTGAAAGTTGATGAAAAAAGCGATGTGTACAGTTTTGGAGTAGTCCTTCTTGAGCTTATAACAGGGAGGAAACCGGTTGGGGAATTTGGTGATGGTGTGGACATAGTGCAATGGGTGAGGAAGATGACAGACTCAAACAAGGAACGAGTTCTGAAAGTTCTTGACCCAAGACTTCCCTCAGTTCCTCTTCACGAGGTGATGCATGTGTTCTATGTGGCAACTTTGTGTGTTGAAGAACAAGCAGTAGAGAGACCAACCATGCGTGAAGTTGTTCAAATCCTAACAGAGCTTCCAAAGTTACCTTCTTCTAAACAGGGAGGAGACTTGTCAACCACAGAGTCATCTCTGTCTTCATATAACCCTCTAGATTCTCCAAAAAAAGAACTGAAAGATCATCAGCATCCTCCTCAATCTCCACCACCTGATCTTCTTAGCATTTAA 2973 0.4548 MSEYRALLSLKAAITDDPHSSLSSWNASTSHCTWSGVTCDFRRHVISLNLTSLELSGSVSNDIAHLPFLTNLSVGDNQLSGPIPPGISVVTSLRFLNLSNNVFNGTFPAQLSELKNLQVLDLYNNNMTGDLPLVVTQMPNLRHLHLGGNFFSGQIPSEYGRWEHLEYLAVSGNELAGTIPPEIGNLTKLRELYIGYYNTYDGGLPPEIGNLSELVRFDAANCGLTGEIPPEIVKLQKLDTLFLQVNALSGPLTPELGSLKSLKSMDLSNNMLAGEIPESFAELKNMTLLNLFRNKLHGAIPEFIGELPSLEVLQLWENNFTGSIPQGLGQNGRLVLVDLSSNKITGSLPPNMCNGNQLQTLITLGNFLFGPIPESLGKCESLTRIRMGENFLNGSIPKGLFGLPKLSQVELQDNLLSGQFPEGASFSVNLGQISLSNNNLSGPLPPTIGNFSGMQKLLLDGNKFSGQIPPQIGRLQQLSKVDFSHNKFSGPIAPEISKCKLLTFVDLSRNELSGEIPNELTGMRILNYLNLSRNHLVGSIPSSISSMQSLTSVDFSYNNLSGLVPGTGQFSYFNYTSFLGNPELCGPYLGRCKGGVSNGAHPPHVKGPLSSSLKLLLVLGLLLCSIAFAVAAIIKARSLKKASEARAWKLTAFQRLDFTADDVLDCLKEDNIIGKGGAGIVYKGAMPNGDQVAVKRLPAMSRGSSHDHGFNAEIQTLGRIRHRHIVRLLGFCSNHETNLLVYEYMPNGSLGEVLHGKKGGYLHWDTRYKVAVEAAKGLCYLHHDCSPLIVHRDVKSNNILLDSNFEAHVADFGLAKFLQDSGTSECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRKPVGEFGDGVDIVQWVRKMTDSNKERVLKVLDPRLPSVPLHEVMHVFYVATLCVEEQAVERPTMREVVQILTELPKLPSSKQGGDLSTTESSLSSYNPLDSPKKELKDHQHPPQSPPPDLLSI 990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0241 990 SMART serkin_6 667 937 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele53g0241 990 SUPERFAMILY RNI-like 47 369 - -
Lele53g0241 990 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 202 940 - -
Lele53g0241 990 MobiDBLite consensus disorder prediction 945 990 - -
Lele53g0241 990 Pfam Leucine rich repeat N-terminal domain 3 40 IPR013210 -
Lele53g0241 990 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 636 744 - -
Lele53g0241 990 Gene3D Ribonuclease Inhibitor 330 595 IPR032675 -
Lele53g0241 990 ProSiteProfiles Protein kinase domain profile. 667 944 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele53g0241 990 ProSitePatterns Serine/Threonine protein kinases active-site signature. 789 801 IPR008271 GO:0004672|GO:0006468
Lele53g0241 990 SUPERFAMILY Protein kinase-like (PK-like) 663 938 IPR011009 -
Lele53g0241 990 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 60 303 - -
Lele53g0241 990 Pfam Protein tyrosine and serine/threonine kinase 669 938 IPR001245 GO:0004672|GO:0006468
Lele53g0241 990 Gene3D Ribonuclease Inhibitor 62 329 IPR032675 -
Lele53g0241 990 Gene3D Ribonuclease Inhibitor 1 61 IPR032675 -
Lele53g0241 990 SMART LRR_typ_2 259 282 IPR003591 -
Lele53g0241 990 SMART LRR_typ_2 307 331 IPR003591 -
Lele53g0241 990 SMART LRR_typ_2 90 114 IPR003591 -
Lele53g0241 990 SMART LRR_typ_2 547 570 IPR003591 -
Lele53g0241 990 SMART LRR_typ_2 138 162 IPR003591 -
Lele53g0241 990 SMART LRR_typ_2 403 427 IPR003591 -
Lele53g0241 990 Gene3D Phosphorylase Kinase; domain 1 634 744 - -
Lele53g0241 990 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 311 596 - -
Lele53g0241 990 Pfam Leucine Rich repeats (2 copies) 115 155 IPR025875 -
Lele53g0241 990 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 745 955 - -
Lele53g0241 990 MobiDBLite consensus disorder prediction 948 966 - -
Lele53g0241 990 Gene3D Transferase(Phosphotransferase) domain 1 745 956 - -
Lele53g0241 990 SUPERFAMILY L domain-like 276 592 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0241 Lele-ChrLele53 1983247 1986662 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0241 1 990 Receptor kinase-like Gene Family AT5G65700 80.962 0.0 1612
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele53g0241 PK_Tyr_Ser-Thr 2e-46 CL0016