Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0208 ATGGGGAATTGTCAGGCGGCGGAGGCGGCGACGGTTGTGATTCAGCATCCGGGGAATAAGCTAGAGAGGATTTATTGGTCGGTGAGCGCTCACCAGGTGATGAACTCCAATCCTGGTCATTACGTTGCTCTCGTTGTTACTTCGCCAACTCTTATGTCTGAGAATGGCGCGCCATTGAAGCAGCTCAAACTTCTTCGACCCGACGATACTCTGCTCATGGGCCAGGTTTATCGCTTGATCAGCTTTGAAGATGTATTGAAGGAGCTATCTGCGAAAAAATGCGTTAAACTCGGGAAATTGCTGGACAGAGGCGGTCTTGGCGTTCACATCAAGCACAGAGACTCCAGAGCTCCAAATCCGCGTTCGAGACCCGATTTCGCTCCCATGAAGGTAAATATTGTACGGTGCCTTGTTTCAAATTGA 423 0.4988 MGNCQAAEAATVVIQHPGNKLERIYWSVSAHQVMNSNPGHYVALVVTSPTLMSENGAPLKQLKLLRPDDTLLMGQVYRLISFEDVLKELSAKKCVKLGKLLDRGGLGVHIKHRDSRAPNPRSRPDFAPMKVNIVRCLVSN 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0208 140 PANTHER EXPRESSED PROTEIN 1 103 - -
Lele53g0208 140 Pfam PADRE domain 1 97 IPR025322 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0208 Lele-ChrLele53 1715498 1716013 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g0208 53 1715498 1716013 Lele49g0362 49 2135313 2138172 CCT
Lele53g0208 53 1715498 1716013 Lele50g0394 50 2207710 2210820 CCT
Lele53g0208 53 1715498 1716013 Lele51g0376 51 2162644 2165519 CCT
Lele53g0208 53 1715498 1716013 Lele52g0391 52 2294682 2297782 CCT
Lele53g0208 53 1715498 1716013 Lele55g1279 55 19282303 19284784 hybridization
Lele53g0208 53 1715498 1716013 Lele56g1226 56 15644506 15646465 hybridization