Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0198 ATGAGCACAATTCTACCTCTCCGACCACGTTGTTGTTCTGGATTGCTACTGAACGGCGAATGTAGAACTTCGGCGACGTATCCGCCTTCTACGGCGGAGTCGTTAGGGTTTATGAAACTTTTTGGAATCAATGTGATTGGATTAGATCACAGAAGTAGAAGTTTGAGCCTGTATGGTAACAGCGTGAGGTCAAACTTTCTCAAGCCGATTAGAGCGGAGGATGACTCTGGCGCGTCTTTGGTTGACGATTGTGCTGAATATTCTGGGAAAAGCACTCTAGCATGTGCTTTGAGTCTGAATTTGCACTCCAGAGGAAAACTGACTTACATCCTTGATGGTGATAATGTTCGGCATGGTCTAAACAAAGATCTTAGTTTTAGAGCTGAAGATCGTTCAGAAAACATACGAAGGATTGGTGAGGTAGCAAAACTCTTTGCAGATGCTGGTGTTATTTGCATTACCAGTTTAATATCTCCTTACCGAAAGGATAGGGATGCTTGCCGAGCACTACTTTCGAAGGGAGATTTTATTGAGGTTTTCTTAGATGTCCCACTACACTTATGTGAATCAAGGGACCCGAAGGGACTCTATAAACTTGCCCGAGCTGGAAAGATAAAAGGTTTCACAGGGATAGACGATTCTTATGAACCACCATCTTGTTGTGAGATAGTGTTACAACAGAAAGGAACTGACTGTGCTTCTCCGAGTGACATGGCAGAAACAGTGGCAGCGTACTTGGAGGAGAAAGGGTACCTGCGGGCCTAA 765 0.4444 MSTILPLRPRCCSGLLLNGECRTSATYPPSTAESLGFMKLFGINVIGLDHRSRSLSLYGNSVRSNFLKPIRAEDDSGASLVDDCAEYSGKSTLACALSLNLHSRGKLTYILDGDNVRHGLNKDLSFRAEDRSENIRRIGEVAKLFADAGVICITSLISPYRKDRDACRALLSKGDFIEVFLDVPLHLCESRDPKGLYKLARAGKIKGFTGIDDSYEPPSCCEIVLQQKGTDCASPSDMAETVAAYLEEKGYLRA 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0198 254 Pfam Adenylylsulphate kinase 88 229 - -
Lele53g0198 254 PANTHER BIFUNCTIONAL 3'-PHOSPHOADENOSINE 5'-PHOSPHOSULFATE SYNTHASE 87 238 - -
Lele53g0198 254 Gene3D - 77 254 IPR027417 -
Lele53g0198 254 CDD APSK 88 225 IPR002891 GO:0000103|GO:0004020|GO:0005524
Lele53g0198 254 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 88 249 IPR027417 -
Lele53g0198 254 TIGRFAM apsK: adenylyl-sulfate kinase 88 231 IPR002891 GO:0000103|GO:0004020|GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0198 Lele-ChrLele53 1658840 1662078 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g0198 53 1658840 1662078 Lele49g0349 49 2061074 2063968 CCT
Lele53g0198 53 1658840 1662078 Lele50g0372 50 2121020 2122675 CCT
Lele53g0198 53 1658840 1662078 Lele51g0362 51 2079677 2081713 CCT
Lele53g0198 53 1658840 1662078 Lele52g0374 52 2203841 2205497 CCT
Lele53g0198 53 1658840 1662078 Lele55g1287 55 19342249 19345488 hybridization
Lele53g0198 53 1658840 1662078 Lele56g1236 56 15698061 15701215 hybridization