Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0194 ATGGCCATAAGGCCCTTCCATTTCACCTTCTCGCCTGATAGATTCTTTTCTCTTCTTCGCGCTCATCCGTTTTCTTCTTCTTCTTCTTCTTCTTCTTGTGCTTGTCCTGCTTCTTCCTGTCCGCAGCGGTATAAACTTCCGCTGTATTCTCGATTGTTTTTCCCTATTTCTTTATTACGTCACTTCACGGCGTTGGCGGCAACTCCGTTCTCACGCGTTAGCCAGTGCTATCCGCCACCGCAACCACACGACGACCGCCTGCGGTCGTTGTCTCCATCCAACACTCTGGCTCAGAAGATTGGAAAATCCATTCGCCGACCGGGCGCTGCCTCGAACGCGAGGGTTCATGCCGATGTCAACGTTGTCCGCCCTAAGGAATATTGGGACTATGAGTCGCTTACTGTCCAGTGGGGGGAGCAAGATGATTACGAGGTTTCGAGGAAGGTGGGAAGGGGGAAATACAGTGAGGTGTTTGAGGGCGTTCACTGCACGGATAATGAAAAGTGTATCATTAAGATTCTGAAGCCAGTGAAGAAGAAGAAGATCAAGAGGGAGATCAAAATATTGCAGAACCTTTGCGGAGGGCCCAATATCGTAAAGTTGCTTGACATTGTTAGAGATCAGCAGTCAAAGACTCCAAGCCTTATTTTTGAATATGTTAACAACACTGATTTTAAAGTGCTCTATCCTACATTGTCGGACTATGACATACGATATTACATCTATGAGCTTCTAAAGGCGCTGGATTATTGCCATTCACAAGGAATTATGCATCGGGATGTAAAGCCACATAATGTAATGATTGACCATGAGCAGCGTAAGCTTCGCCTTATAGATTGGGGGCTTGCAGAATTCTATCATCCTGGTAAAGAATATAATGTTCGAGTTGCCTCAAGATATTTCAAAGGTCCTGAGCTTCTTGTTGATCTTCAAGACTATGATTACTCTTTAGATTTATGGAGTCTTGGTTGTATGTTTGCTGGCATGATTTTTCGTAAAGAGCCATTCTTTTACGGACATGATAATTATGATCAACTTGTCAAAATTGCAAAAGTACTTGGGACAGATGAATTATATGCATATTTGAACAAGTACCGGATAGAGTTGGACCCGAATCTTGCAGCACTTGTTGGAAGGCATAGTCGGAAGCCATGGACAAAGTTCATTAATGTCGATAATCAACATTTGGCTGTTCCTGAGGCTATTGACTTTGTTGACAAGTTACTGCGATATGATCACCAAGAACGACCCACTGCAAAAGAAGCCATGAGCCATCCTTACTTCAATCCTGTTAGAAATGCAGAAAGCAGTCGGTCTCGTGCTTATTGA 1329 0.4394 MAIRPFHFTFSPDRFFSLLRAHPFSSSSSSSSCACPASSCPQRYKLPLYSRLFFPISLLRHFTALAATPFSRVSQCYPPPQPHDDRLRSLSPSNTLAQKIGKSIRRPGAASNARVHADVNVVRPKEYWDYESLTVQWGEQDDYEVSRKVGRGKYSEVFEGVHCTDNEKCIIKILKPVKKKKIKREIKILQNLCGGPNIVKLLDIVRDQQSKTPSLIFEYVNNTDFKVLYPTLSDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIAKVLGTDELYAYLNKYRIELDPNLAALVGRHSRKPWTKFINVDNQHLAVPEAIDFVDKLLRYDHQERPTAKEAMSHPYFNPVRNAESSRSRAY 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0194 442 MobiDBLite consensus disorder prediction 422 442 - -
Lele53g0194 442 Gene3D Phosphorylase Kinase; domain 1 143 219 - -
Lele53g0194 442 FunFam Casein kinase II subunit alpha 129 219 - -
Lele53g0194 442 Pfam Protein kinase domain 143 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele53g0194 442 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 33 - -
Lele53g0194 442 CDD STKc_CK2_alpha 124 428 IPR045216 GO:0004674|GO:0006468
Lele53g0194 442 FunFam Casein kinase II subunit alpha 220 431 - -
Lele53g0194 442 ProSiteProfiles Protein kinase domain profile. 143 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele53g0194 442 ProSitePatterns Serine/Threonine protein kinases active-site signature. 256 268 IPR008271 GO:0004672|GO:0006468
Lele53g0194 442 PANTHER CASEIN KINASE II SUBUNIT ALPHA 107 438 IPR045216 GO:0004674|GO:0006468
Lele53g0194 442 SMART serkin_6 143 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele53g0194 442 SUPERFAMILY Protein kinase-like (PK-like) 116 432 IPR011009 -
Lele53g0194 442 Gene3D Transferase(Phosphotransferase) domain 1 220 428 - -
Lele53g0194 442 ProSitePatterns Protein kinases ATP-binding region signature. 149 172 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0194 Lele-ChrLele53 1629910 1636200 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0194 141 429 Core Cell Cycle Gene Families AT1G76540 30.696 3.95e-41 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CK2 Lele53g0194 Pkinase 1.8e-65 CL0016