Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0191 ATGAATCTTCATATCTTTATCTTCTTCTATCTCATTTCATTGTCCCTATGCCACACGATCACGGGGACCAAATCCATCATCAACTTCAGAACTTTCAATGAATCTCAACCAAGAAGAATCCTTCACCAACCGTTGTTCCCAGACGGTTCCGCTCCACCACCAGCCGCCGTTGAGTCTCCACCGCCGCCTCCGCCGGACACTCCACCTTCTCCCGATATTCCTTTCTTTCACGATAATCCTGTAGGACCAACGCCGGATCAGAATCAGCCACCACCGGCGATTCCCAATGGCGTCACAACAGTTCCGAATCCGACGTTAGCAACAACAACAACGACGGCGAGCAAGCCGACGAAGAAGGTCGCAATCGCCATGTCTGTTGGAATTGTGACGCTTGGTATGCTCTCTGCTCTTGGCTTCTTCTGGTACAGACACCGTGTGAAGCATCCCGGTGAGACCCAGAAGCTTGTGAATGGGAATTCTCAGGGGATTAACGAGGATTCTTCGGGGGGGCCTCCGTCGAGTTTTCTGTACATTGGTACGGTGGAGCCGACACGAGCTGAATCAGGGAGTGAGCCCGTTGAGTCTAATGGAGGAAACAAGTCGCCTTATCATAAACTGAATCCTCCAAAGCCATACGATCGGTCCCGGCCAAGTCCTGAATTGCAGCCATTGCCGCCGCTAACAAAGCCACCAGATGGGAATTACCCGCCGGCGAGTTCTTCTTCTTCTACTGCGTCGTCGTCGGCGTCCGACGAGGAAAGCAACGACATGGCATTTCATACGCCACAAGGGTCATCGCGGAGCTACGAGGATGGCTATTACACAACAATTTCGCGCCAGGGTTCTCTGGCTAACGGTAGTCCAACTATAACTGCGAGAAGTGAGACTAATTCCACTAATTCTCATCTTTTTTCGAAGAGGACATCGCCAAAATCTCGGTTCACTGCTTCTTCGCCGGATGTGAGGCCTGCTATTATACCATCTATAAATCAGGCTCCGCCTCCGTCTCCTCGGCCGCCGCCGGCAACTGGATCAACACCATTTCAGCATGTAGACAAACAAGTGACCTCCGGTGCTTCTAGAAGGCCAAAATTCTCAGCGCCACCTCCGGCACCGAATTTGACGCATCTCCAGTCAACAACAGACTACGCACCCCAGGACACGTCGAGGACTTCATCTAAATATCCTCCTCCGCCGCCTCCGCCTCCGCCTCCACCACTGCAAACAACACCAAGGAAAACAGTGTCCCCGGCAATTAGTGTTCCCTTATCTTCTGCATCAAGAAAGCAACAGTCTTGGTCTGTAAGTGAAGGAACAGCTTCTGTTAAAAGCATAGCAAAAGCCTCAGACGACTCTGAACATGTTGATGAAAGGGTCACCTCTTCCCAGAGCATGGAAGCCGATGACATGGACGGAGGAAAACCCAGGTTAAAGGCTCTGCATTGGGATAAAGTGCGTGCAACCTCAGATCGTGCTACAGTGTGGGACCAGCTAAAATCAAGCTCTTTTCAATTAAATGAGGACATGATGGAGAGCCTGTTTGGCTGCAACAATTCTACAAATGTGGTTCCAAAAGAAGCTCATAGAAAACTAGTTCTTCCTCCTGTGGCTAATCAGGAGGAGAAGGTGCTGGATCCGAAGAAGTCACAGAACATAGCTATACTACTAAGGGCACTGAATGTTTCAAGAGATGAAGTCTGCGGAGCTCTTTCGGACGGGAATCCTGAACGTTTGGGTACTGAGCTATTTGAAACTCTCGTAAAGATGGCTCCCACTAAGGAGGAAGAGATAAAGCTTAAGAAGTATGATGGTGACCTCTCAAAACTTGGCTCTGCAGAAAGATTTCTTAAAGCTGTTCTTGATATCCCTTTTGCCTTCAAAAGAGTTGAAGCCTTGCTCTACATAGCTAACTTTGATACTGAAGTTAATTACTTGAGGAAGTCTTTTCAAACCCTCGAGGCAGCGAGTGAGGAATTGAAGAACAGTCGGCTGTTCCTCAAACTCCTCGAAGCTGTTCTTAGGACAGGAAACAGAATGAATGTTGGCACCAATCGTGGTGATGCTAAATCTTTTAAACTGGACACACTGCTAAAACTGGTAGACATAAAGGGAACCGATGGTAAGACTACATTGCTTCACTTTGTGGTGCAAGAGATCATTAGATCCGAAGGAGCGGGCGGTGATTCTGCGAATGAGAATGTTCAGAAGAAAATGAATTCCAACTTCAATGAGGACGAGTTCAAGAAGCAAGGATTGCAGGTTGTGGCAGGACTAGGCAGAGACCTAAGCAATGTGAAGAAAGCAGCAACAATGGACTCAGATGTCTTGAGCAGCTACGTCACGAAGCTCGAAATGGGGCTAGAGAAAGTGAGATCTGTTCTGCAATATGAAAGATCAGATACGAAAGGGAATTTCTTCAACTCCATGAAGCTATTTTTAAGAGATGCTGAAGAGGAAATGGTTAGGATCAAGGAAGATGAAAGGAAAGCTTTGTTTCTTGTGAAAGAAGTAACAGAATACTTTCATGGGGATACAGCAAAAGAAGAAGCCCACCCTTTCAGAATCTTCATGATTGTAAGAGACTTTCTAAATATTTTGGATCAAGTGTGCAAAGAAGTGGGAAGAATGCAGGATAGAATTATGGTTGGAGCTGCAAGATCTTTCAGAATAGCTTCTACTGCATCACTACTTGTTCTCAACAAGTACCATGCAAGACAAGATAGAAGTTCAGATGAAGAAAGTTCATCCCCATAA 2754 0.4706 MNLHIFIFFYLISLSLCHTITGTKSIINFRTFNESQPRRILHQPLFPDGSAPPPAAVESPPPPPPDTPPSPDIPFFHDNPVGPTPDQNQPPPAIPNGVTTVPNPTLATTTTTASKPTKKVAIAMSVGIVTLGMLSALGFFWYRHRVKHPGETQKLVNGNSQGINEDSSGGPPSSFLYIGTVEPTRAESGSEPVESNGGNKSPYHKLNPPKPYDRSRPSPELQPLPPLTKPPDGNYPPASSSSSTASSSASDEESNDMAFHTPQGSSRSYEDGYYTTISRQGSLANGSPTITARSETNSTNSHLFSKRTSPKSRFTASSPDVRPAIIPSINQAPPPSPRPPPATGSTPFQHVDKQVTSGASRRPKFSAPPPAPNLTHLQSTTDYAPQDTSRTSSKYPPPPPPPPPPPLQTTPRKTVSPAISVPLSSASRKQQSWSVSEGTASVKSIAKASDDSEHVDERVTSSQSMEADDMDGGKPRLKALHWDKVRATSDRATVWDQLKSSSFQLNEDMMESLFGCNNSTNVVPKEAHRKLVLPPVANQEEKVLDPKKSQNIAILLRALNVSRDEVCGALSDGNPERLGTELFETLVKMAPTKEEEIKLKKYDGDLSKLGSAERFLKAVLDIPFAFKRVEALLYIANFDTEVNYLRKSFQTLEAASEELKNSRLFLKLLEAVLRTGNRMNVGTNRGDAKSFKLDTLLKLVDIKGTDGKTTLLHFVVQEIIRSEGAGGDSANENVQKKMNSNFNEDEFKKQGLQVVAGLGRDLSNVKKAATMDSDVLSSYVTKLEMGLEKVRSVLQYERSDTKGNFFNSMKLFLRDAEEEMVRIKEDERKALFLVKEVTEYFHGDTAKEEAHPFRIFMIVRDFLNILDQVCKEVGRMQDRIMVGAARSFRIASTASLLVLNKYHARQDRSSDEESSSP 917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0191 917 MobiDBLite consensus disorder prediction 153 174 - -
Lele53g0191 917 ProSiteProfiles Formin homology-2 (FH2) domain profile. 467 892 IPR015425 -
Lele53g0191 917 MobiDBLite consensus disorder prediction 412 446 - -
Lele53g0191 917 MobiDBLite consensus disorder prediction 99 115 - -
Lele53g0191 917 MobiDBLite consensus disorder prediction 347 361 - -
Lele53g0191 917 MobiDBLite consensus disorder prediction 212 233 - -
Lele53g0191 917 Pfam Formin Homology 2 Domain 473 866 IPR015425 -
Lele53g0191 917 PANTHER FORMIN-RELATED 8 911 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Lele53g0191 917 MobiDBLite consensus disorder prediction 234 316 - -
Lele53g0191 917 SUPERFAMILY Formin homology 2 domain (FH2 domain) 396 879 - -
Lele53g0191 917 Gene3D Formin, FH2 domain 475 891 IPR042201 -
Lele53g0191 917 MobiDBLite consensus disorder prediction 447 475 - -
Lele53g0191 917 SMART it6_source 467 881 IPR015425 -
Lele53g0191 917 MobiDBLite consensus disorder prediction 392 411 - -
Lele53g0191 917 MobiDBLite consensus disorder prediction 42 115 - -
Lele53g0191 917 MobiDBLite consensus disorder prediction 372 391 - -
Lele53g0191 917 MobiDBLite consensus disorder prediction 328 344 - -
Lele53g0191 917 MobiDBLite consensus disorder prediction 152 475 - -
Lele53g0191 917 MobiDBLite consensus disorder prediction 47 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0191 Lele-ChrLele53 1582486 1585570 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0191 38 907 FH2 protein (formin) Gene Family AT5G67470 56.393 0.0 823