Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0190 ATGGCGGCCTCTGCGTTTTCGTTTTCTTCCTCTAGCCTTTTGTGTGAAGAAGATGAAGCTAGCATTTTGAAGGTTGGGGATGAGAATTCTGGCATGGACTGGAAGAACCCATGTTCTGTTTTCGAGGATGAAGACGAATACATTGAGATTTTCCTCAAAAGAGAAATGGGGTTTGTATCCCCAAGTGATGATTGTTCAACAAGTGCTGCTAAATGGCCCAAGAATGCTCGTGTGGATGCCATTGACTGGATTTTCAACACAGGGGCGAAATTCGGGTTTAAATTTCACACCATTTACTTATCAGTGACTTACTTCGATCGATTCCTTTCAAGTCGATCCATTGATGAAGGAAAAGATTGGGCCATTCAATTATTATCGATGGCATGTTTATCTTTGGCAGCAAAAATGGAAGAGCAAGACGTGCCAACTCTATCTGAATTTCCAGGAAAAGAATTTCACTTTGAGATTAAAGTGATTGGGAAAATGGAATTGTTAATTTTGGATTCCTTGGGATGGAAAATGGGATCCGTGACTCCTTTTGCATATCTGCAGTACTTGGTCAAGAAATTTTCCTTGGAATCAAAACTAGAAGCAATAATCTCAAGAGCTATAGATCATATTATGGCAATTGTGAAAGATGTTAATTTAATAGGTCAACGACCATCTGTTATTGCTTCTGCTGCCATATTAGCAGCTTCGGGAACTACATTAACGAGACACTGTGTGGATCTTTGTTTAAGCTCGATATCCTCCTGGGGATCTCTAGAAAGTGAACTTGTATTTTCCTGTTACAATCAAATGCAGGAAATAGAGAGAAGGAAAATTAAGACTCCTGACTCAAATTTGTTGTCAACAACCCATTCTTCCAGCTTCTTCACAGATGTTTTGGAGAATATTTCTGTTCTTTCTTCTGGGACAAAGAGAAAACTCACTTTCCTAGAAAGTGGAACTGAAAGCTATCCTGAACAAAAAAAGATACATCGGCCTTAG 990 0.3919 MAASAFSFSSSSLLCEEDEASILKVGDENSGMDWKNPCSVFEDEDEYIEIFLKREMGFVSPSDDCSTSAAKWPKNARVDAIDWIFNTGAKFGFKFHTIYLSVTYFDRFLSSRSIDEGKDWAIQLLSMACLSLAAKMEEQDVPTLSEFPGKEFHFEIKVIGKMELLILDSLGWKMGSVTPFAYLQYLVKKFSLESKLEAIISRAIDHIMAIVKDVNLIGQRPSVIASAAILAASGTTLTRHCVDLCLSSISSWGSLESELVFSCYNQMQEIERRKIKTPDSNLLSTTHSSSFFTDVLENISVLSSGTKRKLTFLESGTESYPEQKKIHRP 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0190 329 Pfam Cyclin, C-terminal domain 177 275 IPR004367 -
Lele53g0190 329 PANTHER CYCLINS 45 276 IPR039361 -
Lele53g0190 329 ProSitePatterns Cyclins signature. 77 108 IPR006671 -
Lele53g0190 329 SUPERFAMILY Cyclin-like 35 174 IPR036915 -
Lele53g0190 329 Pfam Cyclin, N-terminal domain 49 174 IPR006671 -
Lele53g0190 329 CDD CYCLIN 77 167 IPR013763 -
Lele53g0190 329 SMART cyclin_7 82 168 IPR013763 -
Lele53g0190 329 FunFam Cyclin-D5-1 72 175 - -
Lele53g0190 329 Gene3D - 61 175 - -
Lele53g0190 329 Gene3D - 52 267 - -
Lele53g0190 329 SMART Cyclin_C_2 177 305 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0190 Lele-ChrLele53 1575445 1576812 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0190 13 257 Core Cell Cycle Gene Families AT4G37630 39.231 1.60e-43 149