Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0188 ATGTCAATATATGAATTAGCTCCAGGCATCATTGTTCATCTTGCTATAGGAGATCAAGTCCCCACAGATGGACTCTTCGTTTCAGGATTCTCCGTGTCGATCGATGAATCAAGATTAAACGGAGAAAGGGAACTGGTAACGGTGAATTCTCCGAACCCATTTCTTCTATCTGGAACCAAGTTTCAAGATGGATCCTACAAGATGTTGGTCACAACGGGAGGGATGAGAGCACAATGGGGTAAATTAATGGCGACACTGAGTGAAGGAGGAGATTATGAAACACCATTACAAGTGAAACTTAATGGAGTGGCTATTATCATTGGGAAGATAGGGTTGTTCTTCGCTGTTATTACTTTTGTGGTTTTGATGAAGCGACTTATGTCAAGTAAACGACAAAAAGGAAGATTTTGGAGTGTGTCTGGGGATGATGCCATGGAGATGTTGGAATTCTTCGCTGTTGCAGTTACAATTGTTGTCGTTGCTGTCCCTGAAGGGTTACCATTAGCTGTGACACACAGCCTTGCGTTTGCTATGAAGAAAATTGATGAACGACTAAGCCCTTGTTAG 567 0.4233 MSIYELAPGIIVHLAIGDQVPTDGLFVSGFSVSIDESRLNGERELVTVNSPNPFLLSGTKFQDGSYKMLVTTGGMRAQWGKLMATLSEGGDYETPLQVKLNGVAIIIGKIGLFFAVITFVVLMKRLMSSKRQKGRFWSVSGDDAMEMLEFFAVAVTIVVVAVPEGLPLAVTHSLAFAMKKIDERLSPC 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0188 188 SUPERFAMILY Calcium ATPase, transduction domain A 2 84 IPR008250 -
Lele53g0188 188 SUPERFAMILY Calcium ATPase, transmembrane domain M 87 181 IPR023298 -
Lele53g0188 188 Gene3D - 70 183 - -
Lele53g0188 188 PANTHER CATION TRANSPORTING ATPASE 2 181 - -
Lele53g0188 188 Pfam E1-E2 ATPase 3 181 - -
Lele53g0188 188 Gene3D - 1 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0188 Lele-ChrLele53 1569321 1569887 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0188 1 181 Primary Pumps ATPases AT4G37640 74.033 7.73e-78 249