Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0187 ATGGAGACTTATTTACAAGAAAACTTTGAAGTCAAGTCCAAGAATTCATCTGAAGAGGTTCTTCAGACTTGGAGGAAACTTTGTGGCATTGTTAAGAACCCAAAAGAAGATTTCGCTTCACTTTCAATCTCTCCAACCGAGGCGAAGCGGCTGAAATGCGTCGCACCAATCGGGGAGAAATTGAAGGTTGCTGTTTTGGTTTCCAAAGCGGCATTTCAGTTTATCCAAGGTGTGCAGCCAAGTGATTACACAGTACCTGAAGAAGTTAAAGAAGCAGGCTTTCAGATCTGTGCAGATGAATTGGAATCTATTGTTGAAAGACAAGACGTAAAGAAGCTAAAATTTCATGGAGAGGTTGATGGAATTTCAAAAAAGTTTTCAACATCAACGGAAGATGGTATTAACAATGACTCCGACCAACTTGTCAAGAGACAAGAAATCTACGGAATCAACAAATTCACCGAGCGCGAAGTTCGAAGTTTCTGGGTTTTTGTCTTCGAAGCACTTCAAGACATGATGCTAATGATCCCAGAGGAGCTCACGATGGACTAG 552 0.413 METYLQENFEVKSKNSSEEVLQTWRKLCGIVKNPKEDFASLSISPTEAKRLKCVAPIGEKLKVAVLVSKAAFQFIQGVQPSDYTVPEEVKEAGFQICADELESIVERQDVKKLKFHGEVDGISKKFSTSTEDGINNDSDQLVKRQEIYGINKFTEREVRSFWVFVFEALQDMMLMIPEELTMD 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0187 183 PANTHER CATION TRANSPORTING ATPASE 77 176 - -
Lele53g0187 183 Pfam Cation transporter/ATPase, N-terminus 116 176 IPR004014 -
Lele53g0187 183 Pfam Ca2+-ATPase N terminal autoinhibitory domain 5 35 IPR024750 GO:0005516
Lele53g0187 183 Gene3D - 16 76 - -
Lele53g0187 183 SUPERFAMILY Calcium ATPase, transmembrane domain M 117 176 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0187 Lele-ChrLele53 1568313 1569183 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0187 1 176 Primary Pumps ATPases AT4G37640 63.128 2.27e-71 231