Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0170 ATGTCAGTGGCGTTACTTTTACTGGCAAATGGTGAATGTCGAGCAGTTGTGTGGTTGATACAGCTGGATTTCAAAGATGGGACACAACACTCATATCATCGGCTCTTGAACAAATCTAAGTTTGCTGAAAAAGCAGTTAAGTCCAACGTTGTAACGCCATTAATCGAACTCCTACGAAGTAAGATCAGTTGGGTTGAACGGAGAGTTTCACTTCGAGCATTGGGTCACTTGGCAAGACATGAATCAACCTTTGAAGCTGTAGCAGAACACGAGGAAGAAATCATACAACTAGCCATTCTCATAGCTTCCACGTGCCTGTACGAGGTATATGATAAATTTGTTGGCTTGGAGGAATCTCAGAGATTGGAGTATCATAGGAATCTGCTAACAAGAGGGCTTGGAGGGTTGGAATTAGAGAACAGAAAAGCAGAGGAATGGGCCAGTCAACTTCACGAACCCAAAATGTCTTATGGAATCGGACTTCTTCGAACTCTGTGTCATACAAAACTAGGAAGAGAAAGTATAGCAGAAGTCGAGGATGTCGTAGAGAATCTTTGTAATGTCTCGAGATCTTCAGATGATCGACAACACTTGGCTATTGATAGTCTTCTGCAACTTCTCAAAGGCCCAATCACAAGGTATAAAGTAATTGAAACTGTAGCTCCAGTTCTTGCTGATCTAGTTGAACTCAAAGGAGTTCAAATGATGGAGCGAATTCTGTTACAAGATTATAATAAAATCAAGTTCTTTGAAACGAAACTGAAGAGTGAGAAAGCAGAGAAAGCCCTAAGAACATATGGGATTTGA 807 0.4102 MSVALLLLANGECRAVVWLIQLDFKDGTQHSYHRLLNKSKFAEKAVKSNVVTPLIELLRSKISWVERRVSLRALGHLARHESTFEAVAEHEEEIIQLAILIASTCLYEVYDKFVGLEESQRLEYHRNLLTRGLGGLELENRKAEEWASQLHEPKMSYGIGLLRTLCHTKLGRESIAEVEDVVENLCNVSRSSDDRQHLAIDSLLQLLKGPITRYKVIETVAPVLADLVELKGVQMMERILLQDYNKIKFFETKLKSEKAEKALRTYGI 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0170 268 Gene3D - 29 249 IPR011989 -
Lele53g0170 268 PANTHER ARM-REPEAT/TETRATRICOPEPTIDE REPEAT (TPR)-LIKE PROTEIN 36 151 - -
Lele53g0170 268 SUPERFAMILY ARM repeat 39 207 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0170 Lele-ChrLele53 1411892 1416402 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g0170 53 1411892 1416402 Lele49g0325 49 1921308 1924029 CCT
Lele53g0170 53 1411892 1416402 Lele51g0338 51 1936339 1939062 CCT
Lele53g0170 53 1411892 1416402 Lele55g1313 55 19585144 19586200 hybridization
Lele53g0170 53 1411892 1416402 Lele56g1264 56 15953287 15955343 hybridization