Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0164 ATGAAGAAGTTGGTGGATAAGGTATCTGTTGCAGTATCAGTCTCAATGAACAAAGAAGAAGAAGAAGAATTTATAGGAGAATGGTTGAGTTTAGGACTCGAAGGATCTGCGAAACCTCAGAACATGGAGGACTCTGAAATATCAAAATCATTGCAGAATAATAATAATAAGGTGTTCTCGTGCAATTTCTGCATGAGGAAGTTTTACAGTTCACAAGCCTTGGGGGGTCACCAGAATGCACACAAGAGGGAAAGAGGAGAAGCAAGAAGGAACCAATCTCATAGAATGATGATGGTGGCGTCATCAAGGTCACTTGGCGTGCAGCCACACTCACTTGTGCACAAGCCAAACAGAGAAGGCTCAGGCTCAGGCATGGTGGCTCAATTCAGTGGTGTCAATCTTGGGTTTCAAATGGCATATTGGACGCCATTTTTGGTACAACAAGCTATGGATTTGAGTTGGCCTGGAAGTTTTCGTGTGGATCTGCCAAAACAAGGATCAGATGTAAATAAGCTTGACTTAGATCTTCGGCTCTGA 537 0.432 MKKLVDKVSVAVSVSMNKEEEEEFIGEWLSLGLEGSAKPQNMEDSEISKSLQNNNNKVFSCNFCMRKFYSSQALGGHQNAHKRERGEARRNQSHRMMMVASSRSLGVQPHSLVHKPNREGSGSGMVAQFSGVNLGFQMAYWTPFLVQQAMDLSWPGSFRVDLPKQGSDVNKLDLDLRL 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0164 178 Gene3D Classic Zinc Finger 36 115 - -
Lele53g0164 178 ProSitePatterns Zinc finger C2H2 type domain signature. 61 81 IPR013087 -
Lele53g0164 178 PANTHER ZINC FINGER PROTEIN 4-LIKE 13 178 - -
Lele53g0164 178 SUPERFAMILY beta-beta-alpha zinc fingers 55 85 IPR036236 -
Lele53g0164 178 ProSiteProfiles Zinc finger C2H2 type domain profile. 59 86 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0164 Lele-ChrLele53 1341191 1342070 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0164 57 117 C2H2 Transcription Factor Family AT5G10970 52.564 6.07e-19 79.7