Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0159 ATGGAAGCTCTTCGGATCTCCATGTTTCCTCTCTTCTTCCTTCTTCATTTCTCCTCCGTGGCTTTAGCCTACACTGTTCCGGACAAGTATTTCATCAATTGTGGGTCCGATCACAGCGTAACCGACGGTGGTCAGCTTTTCGTCGGCGACTCTTCTGCTTCTGTCTGCTTTATGAAACAGAGCTACGTCGTGAAGGAACAGATTAAATCGTCAACCACACCTCTCCTGTATCAGACCGCTAGAAAGTGTCGTGTCCCATCTGGTTACAAGTTCAAAATCGACGAAAATGAAAGCGGGTATTATCTGGTACGTCTCCATTTCTATGCTTTCTCGTCCACAGAAAATCTATCTGCGGCTCGATTCAACGTTTCGATTGCGGGATTTTTGTTGCTGGATAATTTCAGTGTCGGAAATCAAACAAACTCTGCGATAATCAAGGAGTTTTATCTGAATATCAGTAGCAATAACAGGAACTTGCAAATCGAATTTTTCCCATCAAATTTCGCATTTGTAAACGCCATAGAACTGTTTAAAATCCCCGATAACTCCATCCCAAGTATGGCATCTCATATTACCAGCAAAGGAAATACCAGTGATTACAAGAACATTCGGATCTCCTCGGTGTTAGGTACGAGGTACAGGCTTGATGTTGGTAATGGTGGCCTTGAGGTAAACGATATCTTGCGAAGAAGATGGGAAAAAGATAGTGGCTTTGACAAAGGAGAAGCTTCATTTCGTTCTGTTGCAATTCAGTTCCACAGAGAAGATGATGATGTTACGGAACAAGATAATGACTTTTCTGGTGTGGCTTCCACTAACGTTATAGCCCCAGAAACTGTTTACCAGACAGCAAGAGTGATGACTCAAGATTCCAGCGACCATAGTAAATTATTTAACGTATCGTGGTCACTTACCGTGAAGAGGAACGCGATCTATTTCATTCGAGCTCATTTCTGTGACATTACCAGTATCGGCCCTGGTCTCACGTACTTCAACTTTTATATCTACGACAACTTCAGTTATCGTATAGATCCCTGGCGTCCTTCTGTTCCTTTTTATCGTGATTTTGTTGTCGATTCCGATGATTCTGAAAAATTGAGGATCAGCGTTGGCCCTGATGAAGCTTCTACTGTTAAGAATGCTTTCTTGAATGGTCTTGAAGTGATGGAAATCATTAAAATTAGAGCTCAATACCCAGAGACCAAGTACCAATGTAATAAGAAGAATCGTCTTCTTCCTCTGGAGGTGGGGCTTGGAGCATTATTGGCACTGATTTGCATTATGGTCATTGGGCTCTGTTTGATTCGGAAATATGGGAAACCAAAGATTTTTAGAACTACTCTGGATTGGGCGCCACTTTCAGTTAGAGGAGGAAGTTCACACGGCAAATATGGAAGCAGCCATGGTGGCGGTTCATCTCTTGGTAACTTAAAACTGGGACTCAAGATCTCTTTCAACGAGATTCAATCTGCAACGAACAATTTCTCCAAAAAACGGATCATTGGGAAGGGTGGATTTGGGAATGTGTACAAGGGAATTCTCAAGAACGGGGTGAAAGTGGCGGCGAAGAGAAGTGAACCAGGTTTATCTTCATCAGGACAAGGATTCTCAGAATTTCAGACAGAGATCATGGTCTTATCCAGAATTCGTCATCGGCATCTTGTTTCCTTGATCGGACCAGCGCTTGATCCTGCACTTGCATGGAACCAAGTGAACTTAGCTGAATGGGGAATGTTCTGCAAGCAAAGAGGAACATTGGAACAGTTGATAGATCCAACGATAAAGCACCAAATAGATCAAAACTCGCTGAAAAAATTTACAGAGACAGTGGGAAAATGTCTGGAAGAAGATGGGTGTAAAAGGCCAACGATGAGTGATGTGTTGTGGGATTTGGAGTATTCATTGCAACTTCAGAGAGGTGCGAGACAGAGGAACTCATCATCTCAAGAGGATGATAATAATACTTCAAGTGCGGTTACAGCATCACTTGAATTGTCCAATGTTAGACGTCTTCCTTCATTGTCGACACAAGCAGATTCAGAAGTTATGTCGATTTTGAACGATGATAGTGCAGCTCATTCTGTTTTCTCGCTCTCAAATATAGACAATGCCGGCCTCAGGACCTTTTGTGCTTGGCCCAGAAGACAACGTGCTGTAGACTTCGTTCTGAATAAGAAGACGGCTTCTGAAATCATCTCCGGAGTTGGCCTTCTTCTCTTTGACGAGAGCTCTCTTCAGAAACTTAGGTTTTGGAGGTGCTCTGCCCTCTGCAAGCCCTGGCCTTGTGACAAGAAGTGTGAGAAGGAGCATAAGTATAACGGAGAGCTTCATTGTTCTTTCACAACGCATAACGGTGAAGAAAATAATGGTGATGTTTTATACGCAGAGAAAGAAGACGGGTGGTAG 2406 0.4306 MEALRISMFPLFFLLHFSSVALAYTVPDKYFINCGSDHSVTDGGQLFVGDSSASVCFMKQSYVVKEQIKSSTTPLLYQTARKCRVPSGYKFKIDENESGYYLVRLHFYAFSSTENLSAARFNVSIAGFLLLDNFSVGNQTNSAIIKEFYLNISSNNRNLQIEFFPSNFAFVNAIELFKIPDNSIPSMASHITSKGNTSDYKNIRISSVLGTRYRLDVGNGGLEVNDILRRRWEKDSGFDKGEASFRSVAIQFHREDDDVTEQDNDFSGVASTNVIAPETVYQTARVMTQDSSDHSKLFNVSWSLTVKRNAIYFIRAHFCDITSIGPGLTYFNFYIYDNFSYRIDPWRPSVPFYRDFVVDSDDSEKLRISVGPDEASTVKNAFLNGLEVMEIIKIRAQYPETKYQCNKKNRLLPLEVGLGALLALICIMVIGLCLIRKYGKPKIFRTTLDWAPLSVRGGSSHGKYGSSHGGGSSLGNLKLGLKISFNEIQSATNNFSKKRIIGKGGFGNVYKGILKNGVKVAAKRSEPGLSSSGQGFSEFQTEIMVLSRIRHRHLVSLIGPALDPALAWNQVNLAEWGMFCKQRGTLEQLIDPTIKHQIDQNSLKKFTETVGKCLEEDGCKRPTMSDVLWDLEYSLQLQRGARQRNSSSQEDDNNTSSAVTASLELSNVRRLPSLSTQADSEVMSILNDDSAAHSVFSLSNIDNAGLRTFCAWPRRQRAVDFVLNKKTASEIISGVGLLLFDESSLQKLRFWRCSALCKPWPCDKKCEKEHKYNGELHCSFTTHNGEENNGDVLYAEKEDGW 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0159 801 Pfam Malectin-like domain 32 390 IPR024788 -
Lele53g0159 801 Gene3D Phosphorylase Kinase; domain 1 472 563 - -
Lele53g0159 801 Gene3D Transferase(Phosphotransferase) domain 1 564 660 - -
Lele53g0159 801 SMART tyrkin_6 495 696 IPR020635 GO:0004713|GO:0006468
Lele53g0159 801 FunFam receptor-like protein kinase FERONIA 461 564 - -
Lele53g0159 801 SUPERFAMILY Protein kinase-like (PK-like) 483 566 IPR011009 -
Lele53g0159 801 Gene3D - 29 180 - -
Lele53g0159 801 Gene3D - 210 392 - -
Lele53g0159 801 PANTHER OS03G0124300 PROTEIN-RELATED 9 435 - -
Lele53g0159 801 ProSiteProfiles Protein kinase domain profile. 495 801 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele53g0159 801 ProSitePatterns Protein kinases ATP-binding region signature. 501 523 IPR017441 GO:0005524
Lele53g0159 801 Pfam Protein tyrosine and serine/threonine kinase 497 562 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0159 Lele-ChrLele53 1291647 1296212 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0159 560 704 Receptor kinase-like Gene Family AT2G23200 41.497 1.01e-26 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lele53g0159 Malectin_like 3.2e-26 CL0202
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g0159 53 1291647 1296212 Lele55g1326 55 19714883 19719297 hybridization