Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0152 ATGGAGCCAGCATATGTGGATTCATCTTCTCAAACTACCTATTCAGCTCCAAATATTGAGCATCATTCGACGAATGTTTCTGGACAAAATGGCAATGACCATAGCCCTGCGCCCTCATCGGCTACTGACAAATCATCCTCGGTGACGAATCTGAAATTTTCACAGTCCTTTGCAGCAAGACAAGGGAACTCCCAGACTGGATATTCTGGGATGTCAAATTTTTCTTTCCTTACCAGTGGGCTTGGACGAATGCTACCAATGCCTTCTGGTCGAAATGAGACTACTCTTGTCAATTCAGAAGCTGAGAAGCCTAATTTAATTGAATCATTCACCAAAGCACGCCATATTGTCTCTCAAAACAAACGGAGATACCAGGATGAAGAGTTCGATTCGGATCTGGCATACATTACCGAAAAAATAATTGTTATGGGATTTCCAGCTCTGGAGTTTTCGGATATATTGAATTATGTCAAATACTTTGAACGGACTTTAACATACTCCAAAAGAGAAGTTCAGCCTGGACGGAGCTATATTTGGAAGATCAGTCTATGGAAACCTATCGCACAGGCATTAATGAAGTTGCCTCTTGAGAAGAAAATGAATATAAAGGTAGGGATAGTTGGGGAATTGGAACATGAGGTGCCTAAGAAATTTTACCAAAGTTTATCAGGTAACACCTCTATTGGATGAGTTCTTTTTACCATAAAAAAGCATCCAATAACAAAGGATCTGATGCCGGAAGATTTTTGGATCAGTGCTCTGAAGAAAGGAATTGTAGTATTTGCATTACCTGGGGAGCCTGGTCTAACACGGGTGGCTGGGGACTTCAAAATTTATTTTAATATGGACAGGGAGATTTCTACTGAGAAAGATCCCTGCTCCAGGATTTCAGGCCGAAGTAGTAACGGCACCCTACCTGCTCGGATAAAAGCCAATCCCGCCAGCAAAGGATCTAGTGGTTACACAGGCAATGCCACCGCCTCGGGTGCGACGCATGCTTCTGATTCAAGAAAGACCAAGGACCCTACAAATGGGGATGATGATGTGTTCTCAGATAGTGAAGGAGAGGACGCCAAAGATTCAGAGAGCAGGGAATCTCAGCATCTGATGCCCACTACTACAGACCATGTTGGAACCTTGACCTCAGGGACAAAGCAGCGGTCACTTCAGAATCAAGAAAGTAAACAAAAGAATGCTACTGAAGAAGTATCAAATAGTCCAGAAAACTCCCAAGACCCCTAG 1242 0.4316 MEPAYVDSSSQTTYSAPNIEHHSTNVSGQNGNDHSPAPSSATDKSSSVTNLKFSQSFAARQGNSQTGYSGMSNFSFLTSGLGRMLPMPSGRNETTLVNSEAEKPNLIESFTKARHIVSQNKRRYQDEEFDSDLAYITEKIIVMGFPALEFSDILNYVKYFERTLTYSKREVQPGRSYIWKISLWKPIAQALMKLPLEKKMNIKVGIVGELEHEVPKKFYQSLSGNTSIGXVLFTIKKHPITKDLMPEDFWISALKKGIVVFALPGEPGLTRVAGDFKIYFNMDREISTEKDPCSRISGRSSNGTLPARIKANPASKGSSGYTGNATASGATHASDSRKTKDPTNGDDDVFSDSEGEDAKDSESRESQHLMPTTTDHVGTLTSGTKQRSLQNQESKQKNATEEVSNSPENSQDP 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0152 413 Gene3D Protein tyrosine phosphatase superfamily 110 177 IPR029021 -
Lele53g0152 413 MobiDBLite consensus disorder prediction 1 46 - -
Lele53g0152 413 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 110 150 - -
Lele53g0152 413 MobiDBLite consensus disorder prediction 315 333 - -
Lele53g0152 413 MobiDBLite consensus disorder prediction 290 413 - -
Lele53g0152 413 MobiDBLite consensus disorder prediction 293 308 - -
Lele53g0152 413 MobiDBLite consensus disorder prediction 367 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0152 Lele-ChrLele53 1215401 1220335 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0152 154 396 Protein tyrosine phosphatase (PTP) family AT3G19420 34.173 4.72e-26 108