Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0145 ATGCCTCATTCCAAAACTCTCTTTCCTCTCTTCTTCTTGTGCTTCACTCTCATCACCACCGTCCTCTCCCATCAATCTCCTCCGGCTTCCTCCAAACTTCTCCTCTCCTCCGACGCCGTTTCTTTGCTCTCTTTCAAGTCCAAAGCCGACCTCGACAACAAGCTCCTCTATTCCCTTCATGAGCGCTTCGATTACTGTCAATGGCAAGGCGTCAAGTGCGCACAGGGCCGAGTGGTTCGCTTCTACCTCCAGGGCTCTGGCCTTCGCGGCGTCTTCGCTCCCTATACCCTCTCTCTTCTCGACCGGCTTCGAGTCCTCTGCCTCCGCAATAACTCCCTATACGGTCCCATTCCCGATCTCTCTCCCCTCTTCAACCTCAAGGCTATCCTTCTCGACCATAATGTCTTCTCTGGTTCGTTACCTCCCTCGTTTCTTCTACTTCATCGCCTTCGTACTCTCTCTCTCTCTCATAACAATCTCACCGGTTCAATCCCTGTCGAGTTAGTTAATTTGGACCGTTTAGTAACCCTCCGCCTTGACTCGAACCGCTTTGATGGAACCGTTCCGCCTTTGAACCAGTCCTCCCTTCTCATCTTCAGTGTCTCCGGCAATAACCTCACAGGGCCGATCCCGGCAACTGTCGCTCTTGCTCGGTTCCACACGGCGTCGTTTTCGGGGAATCCGGGTCTATGCGGGGACATTATTTTCAAAGCATGTGTTCATCCCAGGCCTCGAATCTTTGGTTCTTCTCCCAATGCCTCTGCCTCATTGGGGCAAAGCGCTGAATCACAGGGCAACATAGTCGTTTCTTCGCTGACTGGTAAGAAGCACAAGAGTAACGGCCTGATCCTTGGGTCCACCATTGGTGCGTCGATTCTGATTGCGTCTTTTCTAGGGCTTATGGCGGTGGTTAGGAAACGGAGTATTTCGAGCAATTTAGAAAGCCCAAAAATGGCGGCAACGGAAGCTATGGATGCTCCTCCGGGGAAGAAAACAGAGGAAATCGATGGAGCCGATGATCATCATAATAGAGAGAATTTGGTGTTCTGTTGCGGGGAGGCACAATTGTATACGCTGGAGCAGTTAATGAGAGGGTCGGCGGAGTTACTGGGAAGGGGTAGCATTGGGACTACGTACAAAGCAGTGGTGGATGGGAGATTCACTTTGACAGTAAAGAGGCTAGATGCTGGGAAGACTGCAAGAACAAGTGGCCAAGAGTTTAAGAGGCATATGGAAAGGGTGGGTCAGCTTCGGCATCCAAATTTAGTTCCGGTTAGAGCTTATTTTCAGGCCGAAGCAGAGAGGCTGGTGATCTATGATTATCAATCTAATGGCAGCCTCTTCAACCTCATTCATGGTTCAAGATCAGCAAGAGCAAAGCCTCTTCACTGGACATCATGCTTGAAGATAGCTGAAGACATAGCTCATGGACTTGCATATATGCACCAAACATCAAGATTAATCCACGGCAACCTAAAGTCCTTTAATGTTCTTCTTGGGGCAGACTTTGAAGCTTGTGTTACAGACTATAGTTTGTTCCTCCTTGCAGACTCTTCATCCAGTGATGATCCTGATTCTGCTGCCTATCAAGCACCCGAAACTCGCAACACTAATGGCCCACCTACTTCTAAATCTGATGTCTATACATTTGGGGTGCTTCTACTAGAGCTTCTAACTTCTAAATACCCTTCTCAGCATCCCTTCCTTGTGCCCATGGATTTGCAGGATTGGGTCAGAGCAATGAGGAACGACTATGGTGCTGAAGATAAGCAGCTAGGAATGCTCACAGAGGTCGCAAGTATTTGCACTGTTATATCACCTGAGCAGAGACCAGCTATGTGGCAAGTCTTGAAGATGATACAGGAAATAAAGAAGAGTGTAACACTTGTAGGTAATATAGCTTCTGGATTTTCATAG 1917 0.4867 MPHSKTLFPLFFLCFTLITTVLSHQSPPASSKLLLSSDAVSLLSFKSKADLDNKLLYSLHERFDYCQWQGVKCAQGRVVRFYLQGSGLRGVFAPYTLSLLDRLRVLCLRNNSLYGPIPDLSPLFNLKAILLDHNVFSGSLPPSFLLLHRLRTLSLSHNNLTGSIPVELVNLDRLVTLRLDSNRFDGTVPPLNQSSLLIFSVSGNNLTGPIPATVALARFHTASFSGNPGLCGDIIFKACVHPRPRIFGSSPNASASLGQSAESQGNIVVSSLTGKKHKSNGLILGSTIGASILIASFLGLMAVVRKRSISSNLESPKMAATEAMDAPPGKKTEEIDGADDHHNRENLVFCCGEAQLYTLEQLMRGSAELLGRGSIGTTYKAVVDGRFTLTVKRLDAGKTARTSGQEFKRHMERVGQLRHPNLVPVRAYFQAEAERLVIYDYQSNGSLFNLIHGSRSARAKPLHWTSCLKIAEDIAHGLAYMHQTSRLIHGNLKSFNVLLGADFEACVTDYSLFLLADSSSSDDPDSAAYQAPETRNTNGPPTSKSDVYTFGVLLLELLTSKYPSQHPFLVPMDLQDWVRAMRNDYGAEDKQLGMLTEVASICTVISPEQRPAMWQVLKMIQEIKKSVTLVGNIASGFS 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0145 638 ProSiteProfiles Protein kinase domain profile. 364 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele53g0145 638 MobiDBLite consensus disorder prediction 519 543 - -
Lele53g0145 638 ProSiteProfiles Leucine-rich repeat profile. 149 172 IPR001611 GO:0005515
Lele53g0145 638 FunFam Leucine-rich repeat receptor-like protein kinase 149 241 - -
Lele53g0145 638 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 13 625 - -
Lele53g0145 638 SUPERFAMILY L domain-like 38 232 - -
Lele53g0145 638 SUPERFAMILY Protein kinase-like (PK-like) 368 625 IPR011009 -
Lele53g0145 638 Gene3D Phosphorylase Kinase; domain 1 341 441 - -
Lele53g0145 638 Gene3D Ribonuclease Inhibitor 194 241 IPR032675 -
Lele53g0145 638 Gene3D Ribonuclease Inhibitor 35 193 IPR032675 -
Lele53g0145 638 FunFam Probable inactive receptor kinase At5g67200 37 147 - -
Lele53g0145 638 Gene3D Transferase(Phosphotransferase) domain 1 443 632 - -
Lele53g0145 638 Pfam Protein tyrosine and serine/threonine kinase 368 618 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0145 Lele-ChrLele53 1190403 1193284 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0145 22 629 Receptor kinase-like Gene Family AT3G50230 53.488 0.0 613
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele53g0145 PK_Tyr_Ser-Thr 3.4e-27 CL0016