Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0141 ATGTGGGATCTTAACGACTCGCCTGATCGGATAAACGACGACGGATCAGAAGGCTGTTCTTCACTCCATGATGATAAAGGAAAGCGGGTCGACGGATCTGTTTCCAATTCAAGTTCATCCGCGGTGGTCATGGAGGACGGATCCGCTGACGAAGACGGCGAGGCAAGCCGAGGAATATCAGACGGCAAAGATACCAACAACAAGACGAATATGAAGATGAAGAAGAATAAAAAGAACAAGCGAAGCAGCAAGATATTCGGGTTCTGTGTGACCCATGAAGACTCATCCATGGATAGTGCTGAAGCTGAACCACCTGTAATAACCAGGCAGTTCATGCCGGTGGAGGACGCTGAAGACGTCGCCGGCACCGGCGCCAGCTCATCCTTCCCTCGCTCTCACTGGGTAGGCCTAAAATTCAACCAATCAAAGGCAAACGCCGTCGGCGGCGTGAGATCAGTGGATACAGTGTCGTCGACGTCGTCGCAGCCGATGATTAAGAAAAGCCGGCGAGGGCCACGGTCGAGAAGCTCACAGTATAGAGGAGTCACCTTTTACAGAAGAACAGGTCGATGGGAGTCTCACATATGGGATTGTGGAAAACAAGTCTATCTGGGTGGATTTGACACAGCACATGCAGCCGCTCGTGCATATGATAGAGCGGCGATTAAGTTCAGAGGGGCTGAGGCAGACATAAACTTCAACATAGAAGACTATGAAGAAGACTTGAAACAGATGGGAAATCTGACGAAGGAAGAGTTCGTGCACGTACTTCGCCGACAAAGCACTGGGTTCCCGAGAGGAAGCTCCAAATATAGAGGTGTCACTTTACACAAGTGTGGAAGATGGGAGGCTCGTATGGGCCAATTTCTGGGCAAAAAGTACGTTTATCTGGGTCTATTTGACACCGAGATTGAAGCTGCTAGGGCTTATGACAAAGCAGCAATGAAGTGCAACGGCAAAGACGCCGTCACCAATTTTGATCCCAGTATCTATGAAAATGAGCTTCATTCTGAGTCCTCAGGTAATAATAACGCTGATCATCACAATCTGGATTTAAGTCTGGGCAATACGATGAGCTCAAATAATAATCATACTGCTAGGGAATCATTGGTGAATCTGTTACCAGAACAAGCTAATAGAAGTAACAACATGGAATCTCGTGGAAGAAATGGTGGGCACGGCGAGAGTGAAACGCGGCGTCTTCTGAGTCAAACGCATCTTCTATCTCCACCAGCTTCTGATGAAACCCCCCACAACAGTTATGGTCCCTACATGACTTCTGGACAACCTCAAATTCTTCACCGTTTCCCTCATTTTCACCACCCAAATTATCGTATTCCTTGCAGCAGTAATGGAAACGCAGGTCGTTTGGGAAGAGATCTTTCATTGTCGATGAATGATGATCAAGAACAACGTTGGCAATCTGGGCATTCTCATCAATATATCTCGCCTACTACTACTGCTGCAGCATCATCAGGATTCCCACAGCAGATCACAACTGCCTCACAAGATTGGCTGCAGACAAATGGGTTCCACACTTCTCTCACGAGACCCTCCTGA 1560 0.4788 MWDLNDSPDRINDDGSEGCSSLHDDKGKRVDGSVSNSSSSAVVMEDGSADEDGEASRGISDGKDTNNKTNMKMKKNKKNKRSSKIFGFCVTHEDSSMDSAEAEPPVITRQFMPVEDAEDVAGTGASSSFPRSHWVGLKFNQSKANAVGGVRSVDTVSSTSSQPMIKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGAEADINFNIEDYEEDLKQMGNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEIEAARAYDKAAMKCNGKDAVTNFDPSIYENELHSESSGNNNADHHNLDLSLGNTMSSNNNHTARESLVNLLPEQANRSNNMESRGRNGGHGESETRRLLSQTHLLSPPASDETPHNSYGPYMTSGQPQILHRFPHFHHPNYRIPCSSNGNAGRLGRDLSLSMNDDQEQRWQSGHSHQYISPTTTAAASSGFPQQITTASQDWLQTNGFHTSLTRPS 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0141 519 FunFam AP2-like ethylene-responsive transcription factor 269 329 - -
Lele53g0141 519 MobiDBLite consensus disorder prediction 150 167 - -
Lele53g0141 519 SUPERFAMILY DNA-binding domain 269 329 IPR016177 GO:0003677
Lele53g0141 519 SMART rav1_2 178 240 IPR001471 GO:0003700|GO:0006355
Lele53g0141 519 SMART rav1_2 270 333 IPR001471 GO:0003700|GO:0006355
Lele53g0141 519 FunFam AP2-like ethylene-responsive transcription factor 177 236 - -
Lele53g0141 519 MobiDBLite consensus disorder prediction 6 31 - -
Lele53g0141 519 SUPERFAMILY DNA-binding domain 177 235 IPR016177 GO:0003677
Lele53g0141 519 MobiDBLite consensus disorder prediction 375 399 - -
Lele53g0141 519 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 105 414 - -
Lele53g0141 519 MobiDBLite consensus disorder prediction 375 389 - -
Lele53g0141 519 MobiDBLite consensus disorder prediction 1 79 - -
Lele53g0141 519 Pfam AP2 domain 269 318 IPR001471 GO:0003700|GO:0006355
Lele53g0141 519 Pfam AP2 domain 178 226 IPR001471 GO:0003700|GO:0006355
Lele53g0141 519 PRINTS Ethylene responsive element binding protein signature 271 282 IPR001471 GO:0003700|GO:0006355
Lele53g0141 519 PRINTS Ethylene responsive element binding protein signature 309 329 IPR001471 GO:0003700|GO:0006355
Lele53g0141 519 MobiDBLite consensus disorder prediction 50 71 - -
Lele53g0141 519 CDD AP2 178 235 IPR001471 GO:0003700|GO:0006355
Lele53g0141 519 ProSiteProfiles AP2/ERF domain profile. 270 327 IPR001471 GO:0003700|GO:0006355
Lele53g0141 519 MobiDBLite consensus disorder prediction 150 178 - -
Lele53g0141 519 ProSiteProfiles AP2/ERF domain profile. 178 234 IPR001471 GO:0003700|GO:0006355
Lele53g0141 519 MobiDBLite consensus disorder prediction 334 363 - -
Lele53g0141 519 Gene3D AP2/ERF domain 269 328 IPR036955 GO:0003700|GO:0006355
Lele53g0141 519 Gene3D AP2/ERF domain 177 236 IPR036955 GO:0003700|GO:0006355
Lele53g0141 519 CDD AP2 269 329 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0141 Lele-ChrLele53 1143338 1145884 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0141 1 519 AP2-EREBP Transcription Factor Family AT4G36920 50.844 2.39e-129 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Lele53g0141 AP2 2.7e-10 CL0081