Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0140 ATGGGTTTGTTCTTATCTGCAACTAGAAGCTACGGTTTCGTCTTCTCCGCTGCCCCATCGTGCCTTTTCCTCATTCTGTGTGGCTTCACTATGCAGAAAATAAGATTTCCGGCGACCCCTACCAGAATCAGAAGGCCAAGACCCTCATCCACAGAGATGGTGGCATGGGTTAAAGGAGAGAAGAGGCCCAGATCTAACGATGGGGTTAAAGGAGGTCGCCGTTGTGGGTTGCTTGGCATTGAGGATTCGATGGAGTTTTGTCGTGGGTTGCGGGAGGCCCGCCAATTTCACTCCTCATCCCATTCCTCCCGTCGCAACATCCTAACTGGATCTCGATCCGATTCCCCATTGCCGAATCGGGTCATATTGGCTTCGCCAGCATTGCCGGCGTCAATGGCGTCATCGAAGCCTTTGCCTTCCGCCTCTGCTGACGCACTGGCCTCTCCCACTGGCCAATCGACAAAGAGAGAGCAGGACACTGATTATACTCCTAAGGATGTGCAATCGGTTATTGATTCTTTGAAAGAACAAGTTGCTGCTGAGAGGGGTATTTCCATAAAGAAAACAATGGAAGAAAGTAAAGCAAAGATGGTTGGTGTTACAAACCATCTCTATCAGTTATCAATGGAAAGAACCTGCAGCAGTACTGGTACACAGAGAAGTCTGGACCTACTGACAAGAAGGCAGCTAGATGCAATTGCTATGCACAATGATATTCATGCAAGTAAAGGAGATAAGGAAAGCAATGGCTATCATGAAGATAACCATGCTTCTACAGCTGTTCTTCTAGGTTCTAATGTAGCTGTAAAAAATGCTGTTCGCCCTGTTAAACTACCTGAAGTGAAAAGATTACCTCCATACACTACATGGATTTTTCTGGACAGAAATCAAAGGATGACTGAGGATCAGTCAGTAGTAGGTCGAAGGCGAATTTATTATGATCAAAATGGTGGAGAAGCACTTATTTGCAGTGATAGTGAGGAGGAAATAATAGAGGATAAAGAAGAAAGAGAATTTGTAGAATCGGAAGATTATATACTTAGCATGACTGTAAAAAATTTTGGTTTGTCTGATCTTGTTGTGGAATCACTGGCCCGGTGTTTTTCTAGAAACGCTTGTGACATTAAGGCAAGATATGAAGTTCTCAGTCGTGAAAATGCTGAAAAGAGTTCCCAAAATGGAAATTCGTTTCTGGACAAGGATCTTGAAGCAGCTCTTGATTCCTTTGACAACCTCTTTTGTCGACGATGTCTTGCTTTTGATTGTAGATTGCATGGTTGTTCACAGGATCTCATTTTCCCTGCTGAGAAACAACCTCCGTGGATGCCTCCTGATGCTGAAAATGAACCATGTGGACCAAATTGTTTTCAATTGGTTCTGAAGTCTGAAAGATTTGCCAAAGTGACCTCTTCTGCCCTAGGTGATGTTGAAGAGAAATGCTCAAGTGGTGTTGGGGTGCAAAGATCTTCTAGGAAGAAGTTGTGTTCTCCATCTGCTAGGAGGCGAATAAAGTGCAGCCGAAGTGAAAGCGCTTCCTCAAATGCAAAGAACATATCTGAGAGCAGTGACTCGGAGAATGGCCCAGGACAGAATTCTGCTTCACCTTCCCAGTCAATACCTAAAACTAAAGCTATGTGGAAAAGTGGAGTTAGTAAGAGGAACAGTAAGCGAGTAGCAGAACGTGTTCTAGTTTCCATGCAGAAGAGGCAGAAGAAAACAGTTGCGTCTGATTCTGATTCCATTGGTGAAGCTCTTGATCATTCATCAAATGAGATGGTTCCTGACCCCCCTGTCACAAATAGTGATGAGAACCTGAGTAAAGAAGAGTGTGTAAATGAGAATATATGCAATCAAGAATTCACTGATATTAAATCATGGAAAACTCTTGAAAAAGCGCTTCTAGAGAAAGGGATGGAAATATTTGGTAGAAACAGCTGTTTCATAGCGAGGAATCTCTTAACTGGTATGAAATCATGCTGGGAGGTTTTCCAATATATAAATTGCAATGAGGGAAAGATGCCAGGTCCTGTTGGTGATGCTGCAAATTCCCTTCTGGAAGGCTATTCTAAGGGTAACAATGAACTGAGACGAAGATCAAGGTTTTTACGACGAAGAGGAAGAGTCCGTCGATTGAAGTATACCTGGAAATCTGCTGCTTATCATTCAATTAGGAAAAGAATTACAGAGAGAAAGGATCAGCCCTGTCGTCAATATAACCCATGTGGTTGCCAATCAGCTTGTGGAAAGCAGTGTCCTTGTCTTCAAAATGGAACCTGCTGTGAGAAGTATTGTGGATGCCCCAAGAGTTGCAAGAATCGATTTCGTGGCTGTCATTGTGCCAAGAGCCAATGCCGAAGTCGGCAATGCCCATGCTTTGCTGCAGATAGGGAATGTGATCCTGATGTTTGTAGGAATTGTTGGGTTGGCTGTGGTGATGGCACTCTTGGGATTCCTAGCCAAAGGGGTGATAATTACGAATGTAGGAATATGAAACTTCTTCTCAAACAGCAGCAAAGGGTTCTTCTTGGAAGGTCCGATGTATCTGGATGGGGAGCCTTCTTAAAGAACAGTGTTGGGAAGCATGAATACCTTGGAGAGTATACTGGAGAGCTAATTTCGCATAGGGAGGCAGATAAGCGAGGAAAGATATATGATCGTGAGAATTCATCTTTTCTCTTTAATCTGAATGATCAGTTTGTTCTCGATGCTTATAGGAAGGGCGACAAATTGAAGTTTGCCAATCATTCTCCTGATCCGAATTGCTATGCAAAGGTTATAATGGTGGCTGGGGATCACAGGGTAGGCATTTTTGCCAAGGAACGGATTAATGCAGGGGAGGAACTGTTTTATGATTATCGCTATGAACCAGATAGGGCTCCTGCCTGGGCCCGGAAGCCTGAGGCATCTGGCTCAAAAAAAGAGGATGGTGCTCCTTCAAGTGGTCGTGCAAAAAAGCTTGCTTAA 2964 0.4386 MGLFLSATRSYGFVFSAAPSCLFLILCGFTMQKIRFPATPTRIRRPRPSSTEMVAWVKGEKRPRSNDGVKGGRRCGLLGIEDSMEFCRGLREARQFHSSSHSSRRNILTGSRSDSPLPNRVILASPALPASMASSKPLPSASADALASPTGQSTKREQDTDYTPKDVQSVIDSLKEQVAAERGISIKKTMEESKAKMVGVTNHLYQLSMERTCSSTGTQRSLDLLTRRQLDAIAMHNDIHASKGDKESNGYHEDNHASTAVLLGSNVAVKNAVRPVKLPEVKRLPPYTTWIFLDRNQRMTEDQSVVGRRRIYYDQNGGEALICSDSEEEIIEDKEEREFVESEDYILSMTVKNFGLSDLVVESLARCFSRNACDIKARYEVLSRENAEKSSQNGNSFLDKDLEAALDSFDNLFCRRCLAFDCRLHGCSQDLIFPAEKQPPWMPPDAENEPCGPNCFQLVLKSERFAKVTSSALGDVEEKCSSGVGVQRSSRKKLCSPSARRRIKCSRSESASSNAKNISESSDSENGPGQNSASPSQSIPKTKAMWKSGVSKRNSKRVAERVLVSMQKRQKKTVASDSDSIGEALDHSSNEMVPDPPVTNSDENLSKEECVNENICNQEFTDIKSWKTLEKALLEKGMEIFGRNSCFIARNLLTGMKSCWEVFQYINCNEGKMPGPVGDAANSLLEGYSKGNNELRRRSRFLRRRGRVRRLKYTWKSAAYHSIRKRITERKDQPCRQYNPCGCQSACGKQCPCLQNGTCCEKYCGCPKSCKNRFRGCHCAKSQCRSRQCPCFAADRECDPDVCRNCWVGCGDGTLGIPSQRGDNYECRNMKLLLKQQQRVLLGRSDVSGWGAFLKNSVGKHEYLGEYTGELISHREADKRGKIYDRENSSFLFNLNDQFVLDAYRKGDKLKFANHSPDPNCYAKVIMVAGDHRVGIFAKERINAGEELFYDYRYEPDRAPAWARKPEASGSKKEDGAPSSGRAKKLA 987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0140 987 MobiDBLite consensus disorder prediction 961 987 - -
Lele53g0140 987 SUPERFAMILY SET domain 712 958 IPR046341 -
Lele53g0140 987 MobiDBLite consensus disorder prediction 505 604 - -
Lele53g0140 987 MobiDBLite consensus disorder prediction 100 118 - -
Lele53g0140 987 MobiDBLite consensus disorder prediction 961 980 - -
Lele53g0140 987 MobiDBLite consensus disorder prediction 553 576 - -
Lele53g0140 987 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 85 987 IPR025778 GO:0031519
Lele53g0140 987 SMART CXC_2 772 809 IPR033467 -
Lele53g0140 987 CDD SET_EZH 838 954 - -
Lele53g0140 987 Pfam CXC domain 776 807 IPR041355 -
Lele53g0140 987 Gene3D SET domain 738 955 IPR046341 -
Lele53g0140 987 FunFam Putative histone-lysine N-methyltransferase EZH2 738 955 - -
Lele53g0140 987 ProSiteProfiles CXC domain profile. 724 823 IPR026489 -
Lele53g0140 987 ProSiteProfiles SET domain profile. 838 953 IPR001214 GO:0005515
Lele53g0140 987 Pfam SET domain 849 952 IPR001214 GO:0005515
Lele53g0140 987 Coils Coil 323 343 - -
Lele53g0140 987 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 158 985 IPR045318 GO:0006338|GO:0018024
Lele53g0140 987 MobiDBLite consensus disorder prediction 508 544 - -
Lele53g0140 987 MobiDBLite consensus disorder prediction 98 119 - -
Lele53g0140 987 MobiDBLite consensus disorder prediction 131 165 - -
Lele53g0140 987 SMART set_7 838 959 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0140 Lele-ChrLele53 1116823 1131339 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0140 827 956 C2H2 Transcription Factor Family AT2G23740 27.211 8.51e-10 61.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lele53g0140 SET 5.8e-11 No_clan