Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0137 ATGAACGCGAAGAACACCATTGAAATTGGTGTTTTCACTGGTTACTCTCTTCTCGCCACAGCCCTTGCCCTTCCACAAGATGGAAAGATATTGGCATTGGATACCAACCGGAGGGATTATGAGTTGGGGTTGCCTGTGATTGAAAAAGCAGGCGTTGCTCACAAGATTGACTTTAAAGAAGGACCAGCTCTTCCTGTTCTTGACCACTTGCTGACCGATGAAAAGAACAAGGGAGCGTTCGATTTCATATTTGTGGATGCAGATAAGGAAAATTACTTGAATTACCACAAAAGGGCGATTGAGTTGGTGAAGGTTGGGGGATTGATCGGCTACGACAACACCCTCTGGAACGGCTCTGTTGCTGGCCCACCGGAAGTTCCTCAGTTGGATTACATCAAATACTATCGTGTTTTTGTGTTGGAGCTCAACAAGGCCTTGGCTCTAGATTCTAGGATTGAGATCTGTCAGCTTCCTATTGTTATTATAATGACTTTCGTTAACGAAGAAGCTCCGAAATCTAACTCATCGGGTCAGCATAAAGAAGTGAATCATAAGAGTCTCCTACAAAGTGATGCTCTTTATCAGTATATACTTGAAACCAGTGTTTATCCAAGAGAGCATGAGTGCTTGAAGGAGTTGCGCAACTTGACGACAAAACATCCTTGGAACTTGATGGCTGTATCTGCTGACGAAGGTCAATTTCTGAACTTGTTGCTGAAACTCATGAATGCCAAGAACACACTTGAAATTGGTGTCTTCACTGGTTACTCTCTTCTCGCAACAGCCCTTGCCCTTCCACAAGATGGAAAGGTCCCTTACATATTGGCTTTGGACTTGAACCGTGCAGATTATGAACTGGGGTTGCCTGTAATCGAAAAAGCAGGCGTTGCTCATAAGATTGACTTTAGAGAAGGACCTGCTCTTTCAGTTCTCGACCAGTTGCTCATAGATGAAAAGAACAAGGAAGCGTTCGATTTCATATTTGTGGATGCGGATAAGGACAATTACTTGAACTACCACAAGAGGGCGATTGAGTTGGTAAAGGTTGGGGGAGTGATCGGCTACGACAACACCCTCTGGAACGGCTCTGTTGCGGACCCACCAGAAGCACCTCAATTGGATTACATTAAGTATTATCGTGGTTTTGTTTTGGAGCTCAACGAGGCCTTGGCCGTTGACTCTAGGATTGAGATTTGTCAGCTTCCTGTTGAACTGCATTCAATGCCTTCATATTCTCAGCAAGCGAAGAAGTTGCTAAGCGTTGGGTTCTTCACAGTAAAATCTAAGAAGATACTTAAAATGACTTTCGTTAAGGAAGAAGCGCCCAAAACCCAAGCTGCAGGTCATCATAAAGAAGTTAATCATGAGAGTCTCTTACAAAGCGATGCTCTTTATCAGTATATACTGGAAACCAGTGTTTATCCAAGAGAGCATGAGTGCTTGAAGGAGCTGCGCGACTTGACGACAAAACACCCCTGGAACTTGTTAGCTGTGTCTGCTGACGAGGGTCAATTTCTGAACTTGTTGCTGAAGCTCATGAATGCCAAGAACACCATCGAAATTGGCGTTTTCACTGGTTACTCTCTTCTCGCCACCGCCCTTGCCCTTCCAGAAGACGGAAAGATATTGGCTTTGGACGTCAACCGAGCAGATTATGAGTTGGGATTGCCTGTGATTGAAAAAGCAGGCGTTGCTCACAAGATTGACTTCAGAGAAGGGCCTGCTCTTCCTGTTCTTGACCACTTGCTCACTGATGAAAAGAACAAGGGAGCGTTCGATTTCATATTTGTGGATGCGGATAAGAACAATTATTTGAACTACCACAAGAGAGCGATTGAGTTGGTGAAGGTTGGGGGATTGATAGGCTACGACAACACCCTCTGGAACGGCTCTGTTGCCGACCCACCAGAAATGCCTCAATTGGATTACATCAAGTATTATCGTGGGTTTGTGTTGGAGCTCAACAAGGCTTTGGCACTTGACTCTAGGGTTGAGATCTGTCAGCTTCCTATTGGTGATGGCATTACCCTGTGCCGACGCATCATATGA 2049 0.4495 MNAKNTIEIGVFTGYSLLATALALPQDGKILALDTNRRDYELGLPVIEKAGVAHKIDFKEGPALPVLDHLLTDEKNKGAFDFIFVDADKENYLNYHKRAIELVKVGGLIGYDNTLWNGSVAGPPEVPQLDYIKYYRVFVLELNKALALDSRIEICQLPIVIIMTFVNEEAPKSNSSGQHKEVNHKSLLQSDALYQYILETSVYPREHECLKELRNLTTKHPWNLMAVSADEGQFLNLLLKLMNAKNTLEIGVFTGYSLLATALALPQDGKVPYILALDLNRADYELGLPVIEKAGVAHKIDFREGPALSVLDQLLIDEKNKEAFDFIFVDADKDNYLNYHKRAIELVKVGGVIGYDNTLWNGSVADPPEAPQLDYIKYYRGFVLELNEALAVDSRIEICQLPVELHSMPSYSQQAKKLLSVGFFTVKSKKILKMTFVKEEAPKTQAAGHHKEVNHESLLQSDALYQYILETSVYPREHECLKELRDLTTKHPWNLLAVSADEGQFLNLLLKLMNAKNTIEIGVFTGYSLLATALALPEDGKILALDVNRADYELGLPVIEKAGVAHKIDFREGPALPVLDHLLTDEKNKGAFDFIFVDADKNNYLNYHKRAIELVKVGGLIGYDNTLWNGSVADPPEMPQLDYIKYYRGFVLELNKALALDSRVEICQLPIGDGITLCRRII 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0137 682 CDD AdoMet_MTases 519 621 - -
Lele53g0137 682 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 1 169 IPR002935 GO:0008171
Lele53g0137 682 Gene3D Vaccinia Virus protein VP39 1 166 IPR029063 -
Lele53g0137 682 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 190 403 IPR029063 -
Lele53g0137 682 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 2 160 IPR029063 -
Lele53g0137 682 CDD AdoMet_MTases 7 109 - -
Lele53g0137 682 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 461 680 IPR029063 -
Lele53g0137 682 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 186 414 IPR002935 GO:0008171
Lele53g0137 682 PANTHER O-METHYLTRANSFERASE-RELATED 453 681 - -
Lele53g0137 682 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 457 681 IPR002935 GO:0008171
Lele53g0137 682 CDD AdoMet_MTases 248 353 - -
Lele53g0137 682 Gene3D Vaccinia Virus protein VP39 176 405 IPR029063 -
Lele53g0137 682 Gene3D Vaccinia Virus protein VP39 447 682 IPR029063 -
Lele53g0137 682 FunFam Caffeoyl-CoA O-methyltransferase 1 450 682 - -
Lele53g0137 682 Pfam O-methyltransferase 1 164 IPR002935 GO:0008171
Lele53g0137 682 Pfam O-methyltransferase 199 403 IPR002935 GO:0008171
Lele53g0137 682 Pfam O-methyltransferase 470 681 IPR002935 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0137 Lele-ChrLele53 1074913 1082382 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0137 450 681 Monolignol Biosynthesis Gene Families AT4G34050 77.586 8.62e-135 396