Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0130 ATGGACGTGAATGACAGAAGCATGGACATGATGGCAATGATGATGCAGATGGAAAAGTTTCCTGAATTCTCTGAACCCTTTTACCCATCAGAAACTCCATTCGTCGCCACCGCCGTCACCACCAGTGTGCCCATACTCTCCAATAACACGATCAATCATCCTCCACCTAATAATAATCCCTTCGTGGCCAACACTATTAATCCAATCCCACAACTCATGACACCACACCTAGTTCATCAACCCAACAAAGACGTTGGGTTGAGGAATAATATTACTGATAATAATAATCCCAACGCTACTTCTTCTTCATCTTCCGAGAAGAATGATTCTATGGCCGTCATGAGAGAGATGATATTTCGTATAGCAGTGATGCAACCCATTCACATCGACCCGGAATCCATCAAGCCTCCGAAGAGAAGGAACGTGAAGATATCGAAGGATCCGCAAAGCGTGGCGGCGAGGCACAGGAGGGAGAGAATCAGCGAGAGGATTAGGATTCTGCAGAGATTAGTTCCTGGAGGGACAAAAATGGACACGGCTTCAATGTTGGACGAAGCTATTCATTACGTTAAGTTCTTGAAGAAGCAAGTTCAGACGCTGGAACAAGCAGGAGCGAGTAGAGCCGTGGGTTTCGGGGTACCTACTAGCTTCAATATGAATAATAATTATTCTACTTTCATGAAGGATTATCACCAACCTTCTCAGATGATGGTGGGCAGTTCTATGCAAATGTTAAGCTGA 741 0.448 MDVNDRSMDMMAMMMQMEKFPEFSEPFYPSETPFVATAVTTSVPILSNNTINHPPPNNNPFVANTINPIPQLMTPHLVHQPNKDVGLRNNITDNNNPNATSSSSSEKNDSMAVMREMIFRIAVMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQTLEQAGASRAVGFGVPTSFNMNNNYSTFMKDYHQPSQMMVGSSMQMLS 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0130 246 Coils Coil 183 203 - -
Lele53g0130 246 Gene3D - 143 208 IPR036638 GO:0046983
Lele53g0130 246 Pfam Helix-loop-helix DNA-binding domain 154 193 IPR011598 GO:0046983
Lele53g0130 246 MobiDBLite consensus disorder prediction 81 109 - -
Lele53g0130 246 FunFam BHLH transcription factor 147 209 - -
Lele53g0130 246 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 148 203 IPR036638 GO:0046983
Lele53g0130 246 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 23 243 IPR045843 GO:0003700|GO:0006355
Lele53g0130 246 SMART finulus 150 199 IPR011598 GO:0046983
Lele53g0130 246 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 144 193 IPR011598 GO:0046983
Lele53g0130 246 MobiDBLite consensus disorder prediction 85 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0130 Lele-ChrLele53 1032041 1032781 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0130 1 213 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G50330 54.464 1.58e-50 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele53g0130 HLH 1.5e-06 No_clan