Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0121 ATGGTGAGCAAGTGCAGAAGAATTGCAGAGATTGTTGCAGTAATGGAAATGGCTCAGGTTGGTGTCACGACAAGAGCTCGAGCATCGTTGGCTATGGGAGGAGCAGCTGCTGCAACAGCTTCAGCTGAAAGGAAACCCAAGAGAAGGAGGATCAACAACGAAGAACTCAAATTCTCAGCGTCTTCATCTCTCGTTCAGCTTAAGGGAAGAAGTCGGACTGATGTTATTCAATCGGAAGCCGACCAGCGATGCTCTAGTGCTTTCTCCGATGAACTCCCCTCGTCATGTTGTTCGAGCAACGGATCCAACGGACTTGATGAAGAGAGAATCGAATTCGTAAATCTGGAGGTAGATAGCGCGCAAGTTGAAACATCGACTTGTAATTGCGGTGACGAAAGAAAGATGAGCCCATCCAACGAGCTTCGAGGACCAAATTCAGAAGAAGTGAATAAGCCTACGGCCGAGGCCAACACTCGTTGTATATCAACAGTGCAAAAGATGCCGACGAAGCTGGAGCTCGAAGAATTCTTTGCTGCCGCGGAGAATGACATCCAGAAACGCTTCGCAGAGAAATATTGTTACGACATTGTGAAGGACGTGCCGTTGTGGGAAGGGCGTTACGAGTGGGTTCAAATAAAGCCATGA 645 0.4822 MVSKCRRIAEIVAVMEMAQVGVTTRARASLAMGGAAAATASAERKPKRRRINNEELKFSASSSLVQLKGRSRTDVIQSEADQRCSSAFSDELPSSCCSSNGSNGLDEERIEFVNLEVDSAQVETSTCNCGDERKMSPSNELRGPNSEEVNKPTAEANTRCISTVQKMPTKLELEEFFAAAENDIQKRFAEKYCYDIVKDVPLWEGRYEWVQIKP 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0121 214 MobiDBLite consensus disorder prediction 127 154 - -
Lele53g0121 214 Pfam Cyclin-dependent kinase inhibitor 167 212 IPR003175 GO:0004861|GO:0005634|GO:0051726
Lele53g0121 214 PIRSF CKI_KRP_plant 1 214 IPR044275 GO:0004861|GO:0045736|GO:0051726
Lele53g0121 214 Gene3D p27 145 214 IPR044898 -
Lele53g0121 214 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 4-RELATED 10 213 IPR044275 GO:0004861|GO:0045736|GO:0051726
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0121 Lele-ChrLele53 966956 968144 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0121 109 214 Core Cell Cycle Gene Families AT1G49620 40.541 4.77e-16 71.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0275 50 1624443 1625110 Lele53g0121 53 966956 968144 CCT
Lele51g0276 51 1574368 1574973 Lele53g0121 53 966956 968144 CCT
Lele52g0282 52 1680256 1680863 Lele53g0121 53 966956 968144 CCT
Lele49g0262 49 1541702 1543917 Lele53g0121 53 966956 968144 CCT
Lele53g0121 53 966956 968144 Lele55g1370 55 20065515 20072733 hybridization
Lele53g0121 53 966956 968144 Lele56g1312 56 16362784 16363915 hybridization