Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0112 ATGTCCTCATCGAAAACTCCGTGTGCGGCGTGCAAGCTTCAGAGGCGAAAATGCACTCAAGAATGCGTCTTCGCACCATACTTCCCGCCGGACAACCCTCGCAAGTTCCATAACGTCCACCAGGTGTTCGGCGCCAGCAACGTTTCTAAGCTTCTCTCGGAGCTCAATATGGCTCAACGCGAAGAAGCCGTCAGGTCTTTGGCTTACGAAGCAGAGGCTCGGCTCCGAGACCCAGTCTACGGCTGCGTCGGCCTCATTTCTGCGCTCCAGCAGAGGCTCAGGCAAGTACAAAATGAAGTCGACAAAGCGAGGAAGGAGCTCGCTACTTATATAGGCCCTCAAGCTCTACAACCCATGGTTCCCGTTTTAGATCCTCATCATGGAATGGTCCCGTTACAACCTCACCACCAGGGCAATATTTATGGTCCTTCCGTTTTCCCGTACAATAACATGCCGCCACAGGCCATGGCGGCGCGAGGCGGAGGAGGACAATTGGTGATTCGCGAACCTCAGCAGCAGCAGCAGCAGCATCGTGAAGAGCAGCAGATGTTGGGGTCGCAGTTAGCTACGGATATGGAGGTGAGACAGGTGCAGGAGTTGTTTGGTATTTATGATCATCAGCAACAACAACCGCCGCCGCCGCAGCAGCAGAAAGAGTTTATGAGGTATGGTGGCGGAGCCGGAGTTGAAATGGGCTCAGTTTCCGGGAGTGGATTTAATCAACCTCCAGAGATGTCGCCTTCGCTTGCTCTGAACACATATGACAACCCTTACCATTCTGTACAACAGCAGCAAGGCCAAGGAGGAGATCATCAGCAGAATCAGCATCGCCATCAACTTCAAGAGCAGCTGCTTCTACCGCCGCACCAGAATCAGCCTCTTCACCATCAGCTTCAAGAGCAGCTACTTTTATCTCCGCAGCCACCGCACCATCAGCTTCAGGAGCAGATACTTCTACCACCGCAGCAACCGCAACCGCCGCAGGATCAGCATCAACATCATCAGCTTCAGGAGCAGATGCTTCTACCGCTGCAGCCAGAGCAATCGGAAGTCGTGGATAGTAGAAGCGTCACTCCTTCTGCTTGA 1086 0.5359 MSSSKTPCAACKLQRRKCTQECVFAPYFPPDNPRKFHNVHQVFGASNVSKLLSELNMAQREEAVRSLAYEAEARLRDPVYGCVGLISALQQRLRQVQNEVDKARKELATYIGPQALQPMVPVLDPHHGMVPLQPHHQGNIYGPSVFPYNNMPPQAMAARGGGGQLVIREPQQQQQQHREEQQMLGSQLATDMEVRQVQELFGIYDHQQQQPPPPQQQKEFMRYGGGAGVEMGSVSGSGFNQPPEMSPSLALNTYDNPYHSVQQQQGQGGDHQQNQHRHQLQEQLLLPPHQNQPLHHQLQEQLLLSPQPPHHQLQEQILLPPQQPQPPQDQHQHHQLQEQMLLPLQPEQSEVVDSRSVTPSA 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0112 361 MobiDBLite consensus disorder prediction 234 279 - -
Lele53g0112 361 Pfam Lateral organ boundaries (LOB) domain 7 104 IPR004883 -
Lele53g0112 361 Coils Coil 86 106 - -
Lele53g0112 361 MobiDBLite consensus disorder prediction 317 361 - -
Lele53g0112 361 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 207 - -
Lele53g0112 361 MobiDBLite consensus disorder prediction 328 361 - -
Lele53g0112 361 ProSiteProfiles LOB domain profile. 6 107 IPR004883 -
Lele53g0112 361 MobiDBLite consensus disorder prediction 225 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0112 Lele-ChrLele53 801978 803063 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0112 1 241 AS2 family AT5G66870 50.000 1.00e-63 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele53g0112 LOB 1.4e-40 No_clan