Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0101 ATGGTCAGACCAAATAAAGCTCCTTATAAGCTTCCGCGTTTGTCTAATTGGCTCTTGCAACGGTTTGCTTTGCTTCAGAAGGTGATGAAGGCCACCATGGCTATGAAGTATTATTACAACACTTTGGCGTTGCTATTTTCTCTTCTGTATCATTGTGTGGCTGCTGAACATGATGGATCAGGAGCGTCTTTTATATTTGGAGATTCATTGGTAGATGCAGGAAACAATAATTACCTTTCAACTCTTTCAAAGGCAAATATTCCACCTAATGGTATCGATTTCAAGGCCTCTGGTGGAAATCCCACTGGTCGATACACTAATGGAAGAACCATGGGTGATATTGTTGGAGAGGAGCTTGGACAGCAAAATTATGCAGTCCCATTTTTGGCTCCAAACGCAACCGGCAAAGCTTTGCTGTATGGAGTAAACTACGCTTCAGGAGGAGGAGGGATTCTTAACGCAACTGGAAGAATATTTGTTAATAGGATTGGAATGGATGTTCAGATAGATTACTTCAGCATAACAAGAAAAGATATGGATAAATTGCTAGGCAAAGAAAAAGCGAGGGAATACATTATGAAGAAATCCATTTTCTCAATCACAGTTGGAGCAAATGATTTCCTGAACAACTATCTTCTCCCAGTTCTCTCCATCGGAGCCAGAATCTCTCAGACCCCAGACGCCTTCATAGACGACATGATCAGCCACTTCAGATCCCAGCTTACTAGACTTTACCAAATGGATGCTCGGAAATTTGTGATCGGAAACGTTGGTCCTATAGGATGCATTCCCTACCAGAAAACGATAAACCAGTTGAACGAAGATGAGTGTGTGGATTTGGCTAACAAGCTCGCTCTTAAATATAATGCTCGCCTCAAGGATTTGCTTGCTGAGCTTACTGATAACCTTCCTGGAGCCACCTTCGTGCATGCAAATGTCTACGACATAGTCTTAGAACTCATCACAAACTACAAAAACTATGGGTTTGTGACAGCAAGCAAAGCATGCTGTGGAAATGGGGGCCAATTTGCAGGAATAATACCGTGTGGACCAACATCAAGCATGTGCTCAGATAGGAACAAGCATGTGTTCTGGGATCCTTATCATCCGAGTGAAGCAGCAAACCTAATACTCGCCAAACAGCTTCTCGATGGAGACAAGAGAGCCATATCTCCTATGAATCTTAGGCAACTTCGAGACCTTTGA 1206 0.427 MVRPNKAPYKLPRLSNWLLQRFALLQKVMKATMAMKYYYNTLALLFSLLYHCVAAEHDGSGASFIFGDSLVDAGNNNYLSTLSKANIPPNGIDFKASGGNPTGRYTNGRTMGDIVGEELGQQNYAVPFLAPNATGKALLYGVNYASGGGGILNATGRIFVNRIGMDVQIDYFSITRKDMDKLLGKEKAREYIMKKSIFSITVGANDFLNNYLLPVLSIGARISQTPDAFIDDMISHFRSQLTRLYQMDARKFVIGNVGPIGCIPYQKTINQLNEDECVDLANKLALKYNARLKDLLAELTDNLPGATFVHANVYDIVLELITNYKNYGFVTASKACCGNGGQFAGIIPCGPTSSMCSDRNKHVFWDPYHPSEAANLILAKQLLDGDKRAISPMNLRQLRDL 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0101 401 SUPERFAMILY SGNH hydrolase 66 384 - -
Lele53g0101 401 CDD SGNH_plant_lipase_like 62 386 IPR035669 -
Lele53g0101 401 Pfam GDSL-like Lipase/Acylhydrolase 64 381 IPR001087 GO:0016788
Lele53g0101 401 Gene3D SGNH hydrolase 53 386 IPR036514 -
Lele53g0101 401 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE-RELATED 44 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0101 Lele-ChrLele53 744333 746138 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0101 62 398 Acyl Lipid Metabolism Gene Families AT4G10950 33.432 1.38e-63 207
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0230 49 1360214 1365108 Lele53g0101 53 744333 746138 CCT
Lele53g0101 53 744333 746138 Lele55g1394 55 20302862 20304691 hybridization
Lele53g0101 53 744333 746138 Lele56g1330 56 16560531 16562184 hybridization