LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele53g0094	ATGTCCTATCACCGGAGGAACTTCGTTATTGTGCTCACGATCTTCATCGTCTACTCAACAAGAGCAGAAAAGCCGGGCGACTGTGATCGCAGTTGTGGAAAGTATTCCGTGCCGTATCCTTTCGGATTTTCTGAGAAGTGCCAGATCAAATTAAATTGCAGCGGCAGCCATATGGAAATCGGGGGATTCCAGGTGGATAAAGTAACCCCTAGTAGTATCTTCGTCAATCTTCCTGTGGAATGCAACCGAAGCATGGAATCTATCCAACGGCTTTTCAGCAAAAACTTCGCTCCCACACGGAACAATAGCCTTCTGGTGCGAAGTTGTTCGTCTCAGCAGGGCAGCTGCTTTATACCCGCCAGTCTCACGGGCAGTCTATTAAAATTGGAGAATTGCCATAGTGGTAATATCAGTTGCTTTTTGCAAAAAAAGGATGATACATATTTTCTAACGCGAGCGGAAGTAAATCAGGCTATGTGCAAGTTGATATCTGCGATTGCAATCGAGCAAGGCAAAGACCAGACGATTTCGCTCCGTCTTCAGGTGCTTGAATTGGGGTGGTGGCTTGAAGGTCCACCCGAATGCTCTGAGAATGCAATCCTTACCACAGTCCGACCCGGCGGCGGGAAGACCGGGTACCGGTGCCGATGTCATGAACGTTACATCGGAGATGGCTTCAAGAACGGCACTGCTTGCCGGAAAGTTTCACAGTGCAGAGCCTCAACACTAATGACTGGTGGATGTGGAAAGGCAACTAAAATCGGTGTTCTTGTTGGAGGGATCGTTGCTTTAGTTTTCATCCTGACTGGTGTGTGTCTTCGATGTTACTTTGCTCGGCGTCATACTTGTTTGAGAAAACAAATGACAGTAAAGCGCCTATTACGTGAAGCTGCAGGAAACTCTACTGTTCCTTTTTACGCATACAAAGAAATAGAAAAGGCCACAAATTTTTTCTCTGGGGAACAGAGGTTGGGAACTGGGGCTTTTGGTACGGTATATGCAGGAATACTACACGATACTGAATGTGTTGCAATAAAAAAGATAAAGTACAGAGACACCAACAGTGTTGACCGAGTTATGAACGAGATCAAACTTCTTTCTTCACCTCACAGGGACGCTTGGACCCTCTACTCTGTTCACAAGGTGGCTGAGCTTGCATTTAGATGCCTTGCTTATCATAGTGACATGAGACCTACTATGTTGGAAGTAGCGGAGGAGCTGGAACAAATCAAACGCAGTGGATGGGCAACAATGGAAGAAACTCTATGCACGGCATCATCGATTGGATCCTCGTGTTCGTCACCTCGTATTGGAAGTGAGAAGTCGATGGATCGTATTATTTCTCTTAAAAGAGCAGAACGAGGGAGCAAGAGATCAATGAGTCCAAAGAGGATGGATAAAATACAGCATTCTGTGGAAGAAGTGGATGGCTCTCCTATATCAGTGCATAATCCTTGGTTAAGATGA	1467	0.4588	MSYHRRNFVIVLTIFIVYSTRAEKPGDCDRSCGKYSVPYPFGFSEKCQIKLNCSGSHMEIGGFQVDKVTPSSIFVNLPVECNRSMESIQRLFSKNFAPTRNNSLLVRSCSSQQGSCFIPASLTGSLLKLENCHSGNISCFLQKKDDTYFLTRAEVNQAMCKLISAIAIEQGKDQTISLRLQVLELGWWLEGPPECSENAILTTVRPGGGKTGYRCRCHERYIGDGFKNGTACRKVSQCRASTLMTGGCGKATKIGVLVGGIVALVFILTGVCLRCYFARRHTCLRKQMTVKRLLREAAGNSTVPFYAYKEIEKATNFFSGEQRLGTGAFGTVYAGILHDTECVAIKKIKYRDTNSVDRVMNEIKLLSSPHRDAWTLYSVHKVAELAFRCLAYHSDMRPTMLEVAEELEQIKRSGWATMEETLCTASSIGSSCSSPRIGSEKSMDRIISLKRAERGSKRSMSPKRMDKIQHSVEEVDGSPISVHNPWLR	488

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele53g0094	488	ProSitePatterns	Protein kinases ATP-binding region signature.	324	347	IPR017441	GO:0005524
	Lele53g0094	488	PANTHER	LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4	12	377	IPR044652	GO:0004672
	Lele53g0094	488	SUPERFAMILY	Protein kinase-like (PK-like)	295	369	IPR011009	-
	Lele53g0094	488	Gene3D	Phosphorylase Kinase; domain 1	288	393	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele53g0094	Lele-ChrLele53	702295	705752	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele53g0094	343	487	Receptor kinase-like Gene Family	AT2G23450	47.945	1.87e-27	114

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_WAK_LRK10L-1	Lele53g0094		None	None	None