Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0085 ATGGCTGAAATTAGGCTTACTCGGGTAGAGCAAGGTCAAACCAAGATAAAAAATGTTCCAATCGCTGTCTCCCCCGATGGTTTTTGGTGTTGCCCTTCTCCAGTTGTGTTTCACAAAAGTCTGAAATCTCAAAACCCTCTCAATAAAACCAAACCCTCCTCGTCACCACCACCTCAAAAAATTAGTATCCGGAAAAAGCCAATCCAAGTTAGCGAGAGTAGACCAGCACTTGTCCCACCAAGATCAATGGTTTCTGATGATCAACAGTATGTTGCTCCTGAAAGACATCAAGTTGGTACATCTATGCTTACAGACAGATCAGAGAGACCCAAAATTGAGAATTTACCTAGAAGAGTGGCTATTGAGTTTGGTGAGGCTGGAACTTGTGATATGAAGGTGGTTCTACTTGGAAAGCAGGGGTTTTGTGTGAAGTTGAGCGTGCACAGGGATGTGCTCAAAGAGAAGAGTAGTTTCTTTGCTGATAAACTCTCTGCACAATCTGACTTGTCATGTCTCCAAATTGATGATTGTGAGGATGTTGAAATATATGTTGAGACTGTTGGACTAATGTACTGCAAGGAAATGAAGCAGCGGTTGATGAAACAAAGTGTTCCTCGCATACTTCGGACACTCAGGGTTGCAGAACTTCTTGGCTTCACCAGCTGTATCCAGTCATGTTTGGAGTACTTGGAGGCAGCTCCGTGGGTTGGAGATGAAGAAGAAAAAGTGGTCTCAACAGTTCTACGACTCCAAGTAGAAGGAGTTGGGGTCAACCCTGTGTTGAAACGAGTTTTCTCTGATATCACCAGGGCAACAAATGATACTCTATCCCACATCATCGAACTCGTTCTCACGAGTAAGGAGGAAAAAGGACGCCGAGAGATGAAAAACATAGTTCTGAAACTCCTCAAAGAGAACAACAATGTTCCAAGCCATTCTGGATCTCCAGACATCTGTAAAGAAATGATTTACCGATCATGCAGAAGCTGCTTGGATTCTCTGTTGGCTCTGTTTAGGCAGGCTGCAGAACTAGAGCTGGCTGATAAAGATTCCAGTAACAAAGAACCTAAGCTAAAACACATAGCTGTGGAAGCTGATAACTTGTCATGGTTGCTAGAGATACTAGCCAACAAACAAGCTGCAGATGAATTTGCAGTGATATGGGCGAACCAGCAAGAATTGGCTGTTCTTCATGAGAAGCTACCTATCATGTCCCGTTATTATGTTAGTTGCATCCCAGCGAGATTATACGTTGGCATAGGAAGGGCGGAGCTGTTACCATCCAAGGACACACGTCAGTTGTTGTTACAGACATGGTTACAACCTTTGATCAATGACTTCTGCTGGTTACAACATGGATGCAGGTCTTTTGATAGTAAGGTTGTGGAGGAAGGAATTGGGAGGACTATTCTCACTCTACCTCTGGAGGATCAGCAAAGTATTATGCTTTCTTGGGTGGGAAGTTTTTTGAAGGTTGGGGACAAATGTCCAAACCTTCAGAAAGCTTTTGAGGTGTGGTGGCGGAGAACTTTCACAAGACCTTATGTGGAAGGACAAGGTAACAATAATGTGGGATCTGATACTAGTTTTTTCAATCTTGTCTAA 1605 0.4336 MAEIRLTRVEQGQTKIKNVPIAVSPDGFWCCPSPVVFHKSLKSQNPLNKTKPSSSPPPQKISIRKKPIQVSESRPALVPPRSMVSDDQQYVAPERHQVGTSMLTDRSERPKIENLPRRVAIEFGEAGTCDMKVVLLGKQGFCVKLSVHRDVLKEKSSFFADKLSAQSDLSCLQIDDCEDVEIYVETVGLMYCKEMKQRLMKQSVPRILRTLRVAELLGFTSCIQSCLEYLEAAPWVGDEEEKVVSTVLRLQVEGVGVNPVLKRVFSDITRATNDTLSHIIELVLTSKEEKGRREMKNIVLKLLKENNNVPSHSGSPDICKEMIYRSCRSCLDSLLALFRQAAELELADKDSSNKEPKLKHIAVEADNLSWLLEILANKQAADEFAVIWANQQELAVLHEKLPIMSRYYVSCIPARLYVGIGRAELLPSKDTRQLLLQTWLQPLINDFCWLQHGCRSFDSKVVEEGIGRTILTLPLEDQQSIMLSWVGSFLKVGDKCPNLQKAFEVWWRRTFTRPYVEGQGNNNVGSDTSFFNLV 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0085 534 Gene3D Potassium Channel Kv1.1; Chain A 123 248 IPR011333 -
Lele53g0085 534 PANTHER OSJNBA0011J08.25 PROTEIN-RELATED 118 520 IPR038920 -
Lele53g0085 534 MobiDBLite consensus disorder prediction 42 60 - -
Lele53g0085 534 MobiDBLite consensus disorder prediction 42 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0085 Lele-ChrLele53 655842 658577 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0223 50 1323449 1331938 Lele53g0085 53 655842 658577 CCT
Lele51g0224 51 1257819 1266158 Lele53g0085 53 655842 658577 CCT
Lele52g0226 52 1343219 1351820 Lele53g0085 53 655842 658577 CCT
Lele49g0208 49 1237238 1240611 Lele53g0085 53 655842 658577 CCT
Lele53g0085 53 655842 658577 Lele53g0085 53 655842 658577 ECH
Lele53g0085 53 655842 658577 Lele55g1410 55 20402876 20405624 hybridization
Lele53g0085 53 655842 658577 Lele56g1344 56 16632593 16635574 hybridization