Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0080 ATGGCGTATCGCTTCTTCTTCCTTTTCTCTGCAAATCTTTTTCTTTCTGTAATTCTTATCTTTCCCATTTCACATAGAGCATCTCAACCACAGAACAATAACAAAGGAGCAAACTTTTCATGCCCTGTTGATTCACCTTCTTCCTGTGAAACATACGTCTCATACTTCGCTCAATCTCCCAATTTTCTGAGCATAACAAACATATCTGATTTATTTGGGATGAGTCCTCTGCCAATAGCAAGGGCCAGCAACATAGTGTTTGACGATAACTATAAGCTGATTCCCGGCCAGCTCCTACTTCTACCTATAACTTGTGGCTGCACAGGAAATCATTCATTCTCTAACATCTCCTATTCCATGAAGGAAGGTGATAGCTACCACTTTCTTTCAACCTCTTTGTTTGAAAATCTCACCAATTTGCAAGCAGTGGAAGCTTTAAGTACTAATCTTGACCCAAGTCGCTTGCTAGTAGGGGCCCGTGTAACTTTCCCTTTGTTCTGCAGTTGCCCTTCAAAGACCCAGTTGCAGAAGGGGATCAAGTTTCTAATCACCTATGCGTGGCAACCCCATGACAATTTGGCCAACGTAAGTTCAAAGTTTAATGCTTCTTCGATGGACATAGTAACCGCAAATAACTATATGGACTTCGCAAATTCAGCCAGCCTTCCAGTTTTGATCCCTGTTAGATGCTTACCTGCACTTTCCCAACCTTCCCCTTCATCTCAGAAGGACGACAGAAAAAAGCATCTTCCAATTTTCACTGGTACTTTCGCGGGATTTGCTGTTCTTATTGTTCTTTTAGCGATTCTACTATATGCCTACCGTATGAGGAAGAAAAAGATGGGTTTGAATAGGAAAACTTTGAGTTCGGAGACTGCAGATAAGCTACTTCATGGGGTTTCTTGCTATGTAAGTAAGCCAACCATGTATGAAGCAGGTGTGATCATGGAAGCTACCAAGAAGCTTAATGAAAGGTGCAAGATTGGGAAATCAGCGTACAGAGCCAGAATTGAAGGGCAGGTTGTGGCAGTTAAGAAAGTGAGGGACCAAAATGCCAAGGAGGAGTTAAGAATGATGCAGAAGATGAATCACACAAATCTGGTGAAATTAAGGGGTGTGTCTTCAGACAATGAAGGAAATTACTTCCTAGTTTATGAATATGCAGAAAATGGGTCTCTTGATAATTGGCTTTATCCTGGGTCTTCTTCTTCAAGCTCTATGTCGTTTCTCACATGGAATCTGAGGATAAGCATAGCACTAGATGTCGCCATGGGCCTGCAATACCTGCACGATCACACTCAACCAAGAATAATCCATAGAAACATCACGACAAGTAATATCCTTCTGGACTCCAAATTCAAGGCCAAGATTGCTAATTTCTCCATGGCTAGAACTTGCACGAATCTCGTGATGCTCAAAATAGACGTTTTCGAATTCGGGGTTGTTCTGTTGGAGTTGCTCACAGGGAGGAAAAGCATAGAAACGAATGAACAAGGGGAGGTGATGATGCTGTGGAAGGAATTTATGGGGATATTTAATTTGGAAGAGGGAAGAGAAGAGAGACTCAGAAAATGGATGGATCCTCGGCTTGGAAGCTTATATCCCATTGATGATGCTCTTGGCTTGGCTTCTCTGGCATTGGCTTGCATTGTGGGGAAGTCTATGTCAAGACCAACAATGGGAGAAATCGTTCTGAGCCTCTCTCTTCTCACTCAATCATCATCTGATGCTGCCGTGTTCAAGGGTTCTGGCACATTAGATTTCGAGGTTGCTTCACTAAACAGTCCTATCACAGCTCGTTGA 1803 0.426 MAYRFFFLFSANLFLSVILIFPISHRASQPQNNNKGANFSCPVDSPSSCETYVSYFAQSPNFLSITNISDLFGMSPLPIARASNIVFDDNYKLIPGQLLLLPITCGCTGNHSFSNISYSMKEGDSYHFLSTSLFENLTNLQAVEALSTNLDPSRLLVGARVTFPLFCSCPSKTQLQKGIKFLITYAWQPHDNLANVSSKFNASSMDIVTANNYMDFANSASLPVLIPVRCLPALSQPSPSSQKDDRKKHLPIFTGTFAGFAVLIVLLAILLYAYRMRKKKMGLNRKTLSSETADKLLHGVSCYVSKPTMYEAGVIMEATKKLNERCKIGKSAYRARIEGQVVAVKKVRDQNAKEELRMMQKMNHTNLVKLRGVSSDNEGNYFLVYEYAENGSLDNWLYPGSSSSSSMSFLTWNLRISIALDVAMGLQYLHDHTQPRIIHRNITTSNILLDSKFKAKIANFSMARTCTNLVMLKIDVFEFGVVLLELLTGRKSIETNEQGEVMMLWKEFMGIFNLEEGREERLRKWMDPRLGSLYPIDDALGLASLALACIVGKSMSRPTMGEIVLSLSLLTQSSSDAAVFKGSGTLDFEVASLNSPITAR 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0080 600 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 16 575 - -
Lele53g0080 600 Pfam Protein tyrosine and serine/threonine kinase 339 466 IPR001245 GO:0004672|GO:0006468
Lele53g0080 600 Gene3D Phosphorylase Kinase; domain 1 318 388 - -
Lele53g0080 600 SUPERFAMILY Protein kinase-like (PK-like) 306 567 IPR011009 -
Lele53g0080 600 Gene3D Transferase(Phosphotransferase) domain 1 389 470 - -
Lele53g0080 600 Gene3D Transferase(Phosphotransferase) domain 1 471 583 - -
Lele53g0080 600 ProSiteProfiles Protein kinase domain profile. 290 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0080 Lele-ChrLele53 602134 603936 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0080 40 576 Receptor kinase-like Gene Family AT3G21630 29.784 1.10e-67 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Lele53g0080 PK_Tyr_Ser-Thr 7.9e-23 CL0016