Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele53g0076 | ATGGCGAATGGGTTTGGGGAATCGACGAGCACGTCTTCTCAAAGCCCATCTTGCTCAGGGAATGATTCAAACGATGCTGGGGATTTTGAATGCAATATATGTTTCGATTTAGCCCAGGACCCAGTTATCACTCTGTGTGGTCATCTATTCTGTTGGCCATGTCTCTACCAATGGCTCCACCATCACTCGCATTCTCAAGAATGTCCGGTTTGTAAGGCTCTTGTACAGGAGGAAAAACTGGTTCCATTGTATGGAAGGGGTAAAACACAAACTGATCCCAGAACAAAGTCGTACCCTGGAATGGAGATTCCCCGCCGCCCTGCAGGGCAGAGGCCTGAAGCACCTCCTGCACCAGAAGCCAATCCGTTTGGAAATTATGGGTTTGGATTGATGGGAGGATTTTTACCAATGGCAACAGCTAGGATGGGAAATTTCACCCTTTCTACGGCCTTTGGTGGCTTTATCCCATCGCTTCTTAATATTCAATTCCATGGTTTTCAAGATGCCACTGTCTATGGAACAACCTCTGGTTACCCGTTTGGATTTAATGCCTTTCAAGGAGGACATACACGAGATTTCACCCACCCAACTGGTCAGGGGAATCGGCATGAGGACAATGTTTTGAAGAATCTCTTTTTGTTGGTTGGTGTACTGGTCCTCCTTGCTTTCATTTTTGGGTAG | 681 | 0.467 | MANGFGESTSTSSQSPSCSGNDSNDAGDFECNICFDLAQDPVITLCGHLFCWPCLYQWLHHHSHSQECPVCKALVQEEKLVPLYGRGKTQTDPRTKSYPGMEIPRRPAGQRPEAPPAPEANPFGNYGFGLMGGFLPMATARMGNFTLSTAFGGFIPSLLNIQFHGFQDATVYGTTSGYPFGFNAFQGGHTRDFTHPTGQGNRHEDNVLKNLFLLVGVLVLLAFIFG | 226 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele53g0076 | 226 | CDD | RING-HC_AtRMA_like | 29 | 73 | - | - | |
Lele53g0076 | 226 | FunFam | E3 ubiquitin-protein ligase RNF185 isoform X2 | 14 | 85 | - | - | |
Lele53g0076 | 226 | Pfam | Zinc finger, C3HC4 type (RING finger) | 30 | 71 | - | - | |
Lele53g0076 | 226 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED | 14 | 221 | IPR045103 | GO:0005783|GO:0006511|GO:0061630 | |
Lele53g0076 | 226 | ProSiteProfiles | Zinc finger RING-type profile. | 31 | 72 | IPR001841 | - | |
Lele53g0076 | 226 | SUPERFAMILY | RING/U-box | 27 | 84 | - | - | |
Lele53g0076 | 226 | ProSitePatterns | Zinc finger RING-type signature. | 46 | 55 | IPR017907 | - | |
Lele53g0076 | 226 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 13 | 94 | IPR013083 | - | |
Lele53g0076 | 226 | SMART | ring_2 | 31 | 71 | IPR001841 | - | |
Lele53g0076 | 226 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Lele53g0076 | 226 | MobiDBLite | consensus disorder prediction | 86 | 119 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele53g0076 | Lele-ChrLele53 | 587161 | 587841 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele53g0076 | 21 | 225 | C3H Transcription Factor Family | AT2G23780 | 61.972 | 5.45e-91 | 265 |