Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0065 ATGCCTCCTGGTTATCTATCAAAGCTGAACGCTACCAGGTACTGTCGTTTTCGAGAAAGACTAACTCGGCAACACGGGGTGCGATCTTTGCTATGTGGACATTCATCTGCGTCTCTTACTTCACTCTGTTCAACTTCATATATATCTCATGCCAATCCTTCCTTTTCAAGCCGTAAGCTTAAAAATGAATCAATGGCTGCTTCAACCTCCAAATCTGTAGTGGGAGATGTTTGTGTCGATGATAACCTCTCTAGCTTTAGGAATACGCTAGATTTCAAAACGCCTTTGGGTGACGGAACTCGTAAAGGTTACCTAAGAGCTCATTTGAACCTGAAAAGAAAAGATTCATTAAATAGTACTCTTAATATTAGGTATTCGACTCTTGAGGGTATTTCAAGTTTTCCTTATGGACCATGGCTGAAGAATTTCTCTAGTACATTTTGTACTTCCTACTTTGCCCGGGCAGCACACAATGTCTCATTTGACAGTAGCGCTTGTGATGAACAGCTTGAAAGTTCCTCCCCTACAGTAGACCGAACAATTGATGGTGGCGAGACTTTGAAGCTATTTTCAGGATCTAGTTACCTACCACATCCAGATAAGGAGGAGACAGGTGGAGAAGATGCTCATTTTATTTGCAGTGATGAACAAGCATTTGGTGTTGCAGATGGTGTAGGTGGTTGGGCAGAAGTTGGTGTTAATGCGGGACTGTTTTCTCGTGAACTTATGTCCAATTCAGTAAGAGCAATCCAAGAGGAACCAAAAGGTTCTCTTAATCCAGCGAGGGTGTTAGAGAAGGCTCACTCAAGTACAAGAGCCAAGGGTTCATCAACAGCCTGTATCATTGCCCTTGCTGCGAAGGAGCTACATGCTATTAATTTGGGTGACAGTGGATTCATCGTGATTAGAGATGGAAGCACCATTTTCAAGTCCCCTGTTCAACAGCATGGCTTCAATTTTACGTATCAATTGGAGAGTGGCGATGGAGGCGATTTACCCAGTTCTGGCGAGGTGTTTACAGTGCCTGTTGCTGGAGGAGATGTTGTGATTGCGGGAACAGATGGATTATTTGACAACTTGTACAATAATGAAATTACAGCAGTTGTAGTACATGCAGTTAGAACGGGACTAGAACCCCAGGTAACTGCTCAGAAGATAGCAGCGCTGGCCCGTCAGCGAGCACAAGACAGAAATAGGCAGACTCCATTTTCCACCTCTGCTCAAGAGGCCGGCTTCCGGTATTATGGTGGCAAGCTTGATGACATTACCGTTGTTGTATCATACATAACCTCAGCAAATTCCTGA 1305 0.4398 MPPGYLSKLNATRYCRFRERLTRQHGVRSLLCGHSSASLTSLCSTSYISHANPSFSSRKLKNESMAASTSKSVVGDVCVDDNLSSFRNTLDFKTPLGDGTRKGYLRAHLNLKRKDSLNSTLNIRYSTLEGISSFPYGPWLKNFSSTFCTSYFARAAHNVSFDSSACDEQLESSSPTVDRTIDGGETLKLFSGSSYLPHPDKEETGGEDAHFICSDEQAFGVADGVGGWAEVGVNAGLFSRELMSNSVRAIQEEPKGSLNPARVLEKAHSSTRAKGSSTACIIALAAKELHAINLGDSGFIVIRDGSTIFKSPVQQHGFNFTYQLESGDGGDLPSSGEVFTVPVAGGDVVIAGTDGLFDNLYNNEITAVVVHAVRTGLEPQVTAQKIAALARQRAQDRNRQTPFSTSAQEAGFRYYGGKLDDITVVVSYITSANS 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0065 434 PANTHER PROTEIN PHOSPHATASE 2C 157 433 IPR039123 -
Lele53g0065 434 Gene3D - 332 433 IPR036457 -
Lele53g0065 434 FunFam 5-azacytidine resistance protein azr1 198 323 - -
Lele53g0065 434 ProSiteProfiles PPM-type phosphatase domain profile. 193 429 IPR001932 -
Lele53g0065 434 Pfam Stage II sporulation protein E (SpoIIE) 217 427 IPR001932 -
Lele53g0065 434 SMART PP2C_4 180 427 IPR001932 -
Lele53g0065 434 Gene3D - 199 321 IPR036457 -
Lele53g0065 434 SMART PP2C_SIG_2 203 429 IPR001932 -
Lele53g0065 434 SUPERFAMILY PP2C-like 195 426 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0065 Lele-ChrLele53 507987 510883 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0201 50 1184881 1186986 Lele53g0065 53 507987 510883 CCT
Lele51g0201 51 1136982 1140277 Lele53g0065 53 507987 510883 CCT
Lele52g0203 52 1207015 1208161 Lele53g0065 53 507987 510883 CCT
Lele49g0183 49 1105729 1110925 Lele53g0065 53 507987 510883 CCT
Lele53g0065 53 507987 510883 Lele53g0065 53 507987 510883 ECH
Lele53g0065 53 507987 510883 Lele54g0067 54 549235 552359 ECH
Lele53g0065 53 507987 510883 Lele55g1432 55 20557656 20560563 hybridization
Lele53g0065 53 507987 510883 Lele56g1364 56 16800036 16802914 hybridization