Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0058 ATGGCTGAGACAAAGTTCCTCCTTTGTAGGAAACCATTGAGGAATGACATGAACAGTGAAGAATGAATGTCTTCCTCCCCTGAAACTGCTCCATCTTCAGATCGTGGTGATAATGATGATGAAGATTATAGCCCTGGAGGTTCATCATCACAAAGCCCTCCATCACCCCCACCACCAGACCAGTGGGCCGCAGATCCTACCAAAGATCCAGTTAGGTTTCCGCCGCCGCCACCATCTGGCTCTACTGATTCGCCGAACAACCAACGCTCTTCTGATGACAATTCGTCTTCACCCGGTAAATCGTCTGAATCGCCATCGTCTTTAACACCAAAATCTTCTCACAGGAACAAGCATTCGCCTCCTCCACTACCTGCTGATTCCAGCGAAAATAGCAGCGGCAACAAGAATGACGACAGTAAAGCAATCATCGGAGCCGCCGTTAGTGTAGGGTTTGTTCTTCTTATAATGATCGTCGTCTGTATCATTTGTTGCAGAAGGAAGAAGCGAAAGCATAGGTATTACTATTCGGACGATGGCAAACCCGGCAAAACTGGTGATTATTACAACAGGGGGCAGAACCAAAATAAATGGCACCCTGGTGTGAATGACCATGTTGTGAGGATGCAGCAATCACCGGGCATGGGTATGGGCATGGGTCCGGATAGTGGTGCGTGGGGGCCGGTTCCACCGCCTCCTCCTCCACACAGCACAGATATGAGTTCAAATTACTCACTGGGGCCACCAATGCCTCCACCATCGCCGGGGCTGACTTTAGGGCTGAACTGTGGGACCTTCTCTTTTGAAGACTTGGCCGCGGCAACGGAGGGCTTTGCCGATAAGAATCTGATAGGACAAGGAGGTTTTGGTTACGTGCATAAGGGTGTTTTGCCTAATGGAAAAGAAGTTGCAGTGAAGAGCTTGAAAGCCGGTAGTGGCCAAGGAGAACGTGAGTTCCAAGCTGAGATTGAAATCATTAGTCGTGTTCATCATCGTCATCTTGTGTCGCTTAATGGCTACTGTATTGCTGGTGGACAACGGATGTTGGTTTATGAATTTGTTCCTAATAACACTCTTGAGCATCACCTTCATGAATATGCATCAAGTGGGAAATTGACTGAGAAGTCCGACGTGTTCTCTTTCGGAGTGATGTTATTAGAAATCATAACGGGGAAGAGACCTATAGATATCCAAAATATGGTGGACGATAGTTTAGTAGACTGGGCTCGACCACTCTTGGCAAGAGGGCTGGAGGATGGCAACTTTGAAGCACTGGTGGATCCGTTCTTGGAAGGCAATTACAATAACCAGGAATTGTCTCTCATGGCTGCCTGTGCTTCTGCCAGCATTCGTCATTCCGGCAAGAAACGTCCTAAAATGAGCCAGATCGTAAGAGCACTGGAAGGGGATGTGTCACTGGATGACTTAAACGATAAGGCAGGGCATCAGGGGCACCTTCTGGCATCTTCATCGAGCTCAGAGTACGATTCAAGTGCGTATCAGGCCGATATGAAGAGGTTCAGACAATTAGCTCTTGCGAGTCAGGAATTCGCAAGCAGTGAATCAAGTGGTGAAATGTCACAGGTTACAACTAGTTTCTCCTCTTACGGGTGGATTTTGGGCATTGTTTGCACCCAGATTAGTGGTAGACCTGTGGCCCTGGAAATGATAACCCGATCTAAACTTGTCGAGCAGCTCAGAGATTACCAGATCCGATCCCAGCACAAGTACTCTGCTCTCACAGTCTTCTCTCCCAAACCCCATGTCAATACTCGGGTTGATGTTGCTGTGGCAATTATTTTCGCCTTATTATTTGGCATCCTTTCACTGTTAGCCTGTGTAACCCTTTACTTCAGGCGCTTTTGGATTTTCTTGGTTGTGATCATACAGTTGAGCGCAGTGAACAGCCATAAGCTTACCAAGTCATTTCGGAAGTCTAGATCTGCACTTGTTTTATTGATAATAAGAGCAGTTTCCAAAGTGTTATTGGCGTTTGTTGAGGAAGAACCCTACAATTCTCTAGACAAATGGGCCAGGAGCTTACATCTTGTAACAGCTGAGGGTATAACTTCATCTGCAGTTGCTGGCATACGAAGTAAAGTCCAAAGTATTAGCACTCTTTGA 2121 0.4701 MAETKFLLCRKPLRNDMNSEEXMSSSPETAPSSDRGDNDDEDYSPGGSSSQSPPSPPPPDQWAADPTKDPVRFPPPPPSGSTDSPNNQRSSDDNSSSPGKSSESPSSLTPKSSHRNKHSPPPLPADSSENSSGNKNDDSKAIIGAAVSVGFVLLIMIVVCIICCRRKKRKHRYYYSDDGKPGKTGDYYNRGQNQNKWHPGVNDHVVRMQQSPGMGMGMGPDSGAWGPVPPPPPPHSTDMSSNYSLGPPMPPPSPGLTLGLNCGTFSFEDLAAATEGFADKNLIGQGGFGYVHKGVLPNGKEVAVKSLKAGSGQGEREFQAEIEIISRVHHRHLVSLNGYCIAGGQRMLVYEFVPNNTLEHHLHEYASSGKLTEKSDVFSFGVMLLEIITGKRPIDIQNMVDDSLVDWARPLLARGLEDGNFEALVDPFLEGNYNNQELSLMAACASASIRHSGKKRPKMSQIVRALEGDVSLDDLNDKAGHQGHLLASSSSSEYDSSAYQADMKRFRQLALASQEFASSESSGEMSQVTTSFSSYGWILGIVCTQISGRPVALEMITRSKLVEQLRDYQIRSQHKYSALTVFSPKPHVNTRVDVAVAIIFALLFGILSLLACVTLYFRRFWIFLVVIIQLSAVNSHKLTKSFRKSRSALVLLIIRAVSKVLLAFVEEEPYNSLDKWARSLHLVTAEGITSSAVAGIRSKVQSISTL 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0058 706 MobiDBLite consensus disorder prediction 123 138 - -
Lele53g0058 706 MobiDBLite consensus disorder prediction 50 82 - -
Lele53g0058 706 MobiDBLite consensus disorder prediction 1 138 - -
Lele53g0058 706 Gene3D Transferase(Phosphotransferase) domain 1 353 481 - -
Lele53g0058 706 MobiDBLite consensus disorder prediction 83 116 - -
Lele53g0058 706 FunFam proline-rich receptor-like protein kinase PERK1 255 352 - -
Lele53g0058 706 MobiDBLite consensus disorder prediction 209 250 - -
Lele53g0058 706 ProSitePatterns Protein kinases ATP-binding region signature. 283 305 IPR017441 GO:0005524
Lele53g0058 706 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 148 363 - -
Lele53g0058 706 Pfam Protein tyrosine and serine/threonine kinase 281 365 IPR001245 GO:0004672|GO:0006468
Lele53g0058 706 Gene3D Phosphorylase Kinase; domain 1 257 352 - -
Lele53g0058 706 MobiDBLite consensus disorder prediction 18 32 - -
Lele53g0058 706 SUPERFAMILY Protein kinase-like (PK-like) 263 467 IPR011009 -
Lele53g0058 706 ProSiteProfiles Protein kinase domain profile. 277 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0058 Lele-ChrLele53 465217 475040 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0058 140 363 Trihelix Transcription Factor Family AT1G23540 44.589 2.11e-45 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Lele53g0058 PK_Tyr_Ser-Thr 2e-14 CL0016