Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0051 ATGGTCAACCTCGTCGCAGCACAGAGGCCATTATTGCATGGGCTAATGAAGATGGCGGGTATTGCACCCTACACGGTGGAGATAGAGCCTGGCACGGTCATGACCTTCTGGGTTCCGGCCAACACTATCTCTAAGCTCAAAAAGTCCGACGAAGCACCCCAAGTCATCGGCAAGCCCACCAAACCCGTAGTGGTACTGGTTCACGGTTTCGCAGCGGAGGGAATAGTGACGTGGCAGTTCCAGGTCGGAGCACTTACCAAAAAATACTCGGTTTACGTGCCAGACCTGCTGTTCTTCGGGGGTTCAACGACGGATAAGCCGGAACGGAGGCCGGGGTTTCAAGCAGAGTGTTTGGTGAGAGGGTTGAGGAAGCTGGGGGTGGAGGAGTGTGTGGTGGTTGGGTTTAGCTATGGAGGGATGGTGGGTTTCAAGATGGCGGAGATGTGCCCGGAGATGGTGAGAGGGTTGGTGATATCAGGCTCTATTTTGGCTATGACGGATAACATAAGCGAAAATACGTTGAAAGAGTTAGGATTCTCGTCGTCGTCGGAGCTGTTGTTGCCCACTTCCGTTAAGGGACTGAAAGCTCTTTTGTCAGTGGCTACTTACAAGAAGCTCTGGTTCCCTGATCGCCTCCATAAAGACTTTCTTGAGGTGATGTTCACAAACAGGAAAGAGCGAGGTGAGCTGTTGGAGGGCTTACTCATCAGCAACAAAGACATCACCATTCCAAAATTCCCCCAGAGAATACACCTTTTGTGGGGGGAGAAGGACCAGATCTTCAAAGTGGAGTTGGCACTCAATATGAAAGAGCAACTGGGGAGAAATGCAACGTTTGAAGGGATAAAGAAGGGAGGCCACCTGGTTCACCTGGAGAGGCCTTGCGTCTACAATAGATGCCTCAAGCACTACCTTTCTTCTCTGCAACTCCCCACTCCCACTCCTCAATGA 951 0.5142 MVNLVAAQRPLLHGLMKMAGIAPYTVEIEPGTVMTFWVPANTISKLKKSDEAPQVIGKPTKPVVVLVHGFAAEGIVTWQFQVGALTKKYSVYVPDLLFFGGSTTDKPERRPGFQAECLVRGLRKLGVEECVVVGFSYGGMVGFKMAEMCPEMVRGLVISGSILAMTDNISENTLKELGFSSSSELLLPTSVKGLKALLSVATYKKLWFPDRLHKDFLEVMFTNRKERGELLEGLLISNKDITIPKFPQRIHLLWGEKDQIFKVELALNMKEQLGRNATFEGIKKGGHLVHLERPCVYNRCLKHYLSSLQLPTPTPQ 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0051 316 Gene3D alpha/beta hydrolase 53 309 IPR029058 -
Lele53g0051 316 SUPERFAMILY alpha/beta-Hydrolases 56 305 IPR029058 -
Lele53g0051 316 PRINTS Epoxide hydrolase signature 88 103 IPR000639 GO:0003824
Lele53g0051 316 PRINTS Epoxide hydrolase signature 132 145 IPR000639 GO:0003824
Lele53g0051 316 PRINTS Epoxide hydrolase signature 146 159 IPR000639 GO:0003824
Lele53g0051 316 PRINTS Epoxide hydrolase signature 282 304 IPR000639 GO:0003824
Lele53g0051 316 PANTHER SI:DKEY-122A22.2 1 306 - -
Lele53g0051 316 Pfam alpha/beta hydrolase fold 62 172 IPR000073 -
Lele53g0051 316 PRINTS Alpha/beta hydrolase fold signature 132 145 IPR000073 -
Lele53g0051 316 PRINTS Alpha/beta hydrolase fold signature 88 103 IPR000073 -
Lele53g0051 316 PRINTS Alpha/beta hydrolase fold signature 146 159 IPR000073 -
Lele53g0051 316 PRINTS Alpha/beta hydrolase fold signature 250 264 IPR000073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0051 Lele-ChrLele53 401003 403360 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0176 50 1031083 1031962 Lele53g0051 53 401003 403360 CCT
Lele51g0172 51 985898 986764 Lele53g0051 53 401003 403360 CCT
Lele52g0175 52 1040004 1040890 Lele53g0051 53 401003 403360 CCT
Lele53g0051 53 401003 403360 Lele54g0052 54 437381 440007 ECH
Lele53g0051 53 401003 403360 Lele53g0051 53 401003 403360 ECH
Lele53g0051 53 401003 403360 Lele55g1446 55 20668859 20671042 hybridization
Lele53g0051 53 401003 403360 Lele56g1381 56 16924196 16926643 hybridization