Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0048 ATGGCATCATCATCTTGGACACCGAGGCAAAACAAACTATTTGAACGAGCTCTGGCTTTATACGATAGGGAAACCCCTGATAGGTGGCAGAATGTTGCCAGAGACGTGGGAAAATCTGTGGAGGAGGTCAAAAGGCATTATGAGATCCTCAAAGAAGATGTCAAACGCATAGAGCATGGTCAAGTCCCCTACCCCTACTACACCTTTGTCCTGCAGTACTTGAAAGGACTATTTATTCCTTTGATAATTGGCCAATATCCTGCATGGGCATCAAACTTGTTGTCATTCAGATATAGTGCATCCGACTTAGTCCATGGTGCTGATTCTGTTCTGCCCATTCAGGATAATTTATTAACCATCCTATGCCACATGCTTCAAACTATATCCGATGGTAGTGAAGTAAGAAACAACGGTTTGGGAGGCAGACCTGTGAAGGCGCGTAAAAAGCGGCCACATTTCATGAATTTTGAGACACGTGTCGAAAAAACAAGGTGTCCATTTGGTCCACGTGGACACCCGCTGAAACCGTATTATAAGAACACCAGACGAAATCAGAAACAAGAAGAAGAAGAAGCAAAGAGGAAGAAAAAGATGGGAAACGCAAAGGTGTTGCTGGTGATGTTGGTGATAGCAGTGAGCGCGGGAAGGTGCAGGTGTGATGGGGTCGAAGGAGTAGCCGATGCAGCCCAGCAGAAAGCCGAGGAGGCCCAGAAGGCAGCCCCCGCCGTCATCGAAGATGCCAAAGACACCACCGAGACATGGGCCAATTGGGCTTATGACAAAACCATGGGGTTGAAGAAGGAAGGAGATCAACAAGTGTCTCAAACCCAGAAAATCTCGACCGACGCAGCGAACGAAGCGTGCAACAAAGCTGGCGAGCAGATGCACAAGGCGAAGGAGAAAGCTTCAGAAATTGCTGGAAATGCCAAAGAACACGCAGCAAATGTTGTGGTGAGGGCATCTGAAACGGCTTGTGATGCAAAAGAGGCCGTGGCAGGCACAGTATCACAAGCTTCACAAAACGTGGGTGAAGCTGCCATGAATGCCAAGGACACCGTCATCGAAAAGGCAGGTTCTGTGGACGTGCAAGGCACAGTATCACAAGCTACGGCAAACGTGGTTGACGCTGCCAAGATGGCCAAGGACACCGCCGCTGAAAATCTCGAGACTGTGAAACAAACGGTGTCGCAGTCCCCCGGCGATCTCTGA 1209 0.4905 MASSSWTPRQNKLFERALALYDRETPDRWQNVARDVGKSVEEVKRHYEILKEDVKRIEHGQVPYPYYTFVLQYLKGLFIPLIIGQYPAWASNLLSFRYSASDLVHGADSVLPIQDNLLTILCHMLQTISDGSEVRNNGLGGRPVKARKKRPHFMNFETRVEKTRCPFGPRGHPLKPYYKNTRRNQKQEEEEAKRKKKMGNAKVLLVMLVIAVSAGRCRCDGVEGVADAAQQKAEEAQKAAPAVIEDAKDTTETWANWAYDKTMGLKKEGDQQVSQTQKISTDAANEACNKAGEQMHKAKEKASEIAGNAKEHAANVVVRASETACDAKEAVAGTVSQASQNVGEAAMNAKDTVIEKAGSVDVQGTVSQATANVVDAAKMAKDTAAENLETVKQTVSQSPGDL 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0048 402 MobiDBLite consensus disorder prediction 171 196 - -
Lele53g0048 402 MobiDBLite consensus disorder prediction 181 196 - -
Lele53g0048 402 CDD SANT 5 51 IPR001005 -
Lele53g0048 402 Gene3D - 1 64 - -
Lele53g0048 402 ProSiteProfiles SANT domain profile. 1 55 IPR017884 -
Lele53g0048 402 SMART sant 2 53 IPR001005 -
Lele53g0048 402 Coils Coil 219 239 - -
Lele53g0048 402 Coils Coil 178 198 - -
Lele53g0048 402 FunFam Transcription factor SRM1 1 64 - -
Lele53g0048 402 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 3 184 IPR044636 GO:0003700
Lele53g0048 402 SUPERFAMILY Homeodomain-like 4 58 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0048 Lele-ChrLele53 381205 385112 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g0048 53 381205 385112 Lele54g0048 54 419807 420022 ECH
Lele53g0048 53 381205 385112 Lele53g0048 53 381205 385112 ECH
Lele53g0048 53 381205 385112 Lele55g1450 55 20690446 20691144 hybridization