Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g0025 ATGGCGGGTTTATTCTCACTAGGCGGTGGAGGTAGAGGAACGAACCAGCAGCAAGAAGAAGAAGAAGCACGAGGCCATCATAACACAACCACGGAATTCCCTCCGGCCGAGACCCTATACTGGTACAAGAACGAGGATGCGTCGTCGATCAGAGGATTCGAGCTATGGAACCAGCAGCAGGAGCAGTTCATGGCAGGACAACAAGCGTACGATGATCCGTCGTCGTCGTCGAGATCCTCAGGGATGATGACGATGAGAGAGCGCCAGGATTTTCCTGCAGTGGTAAGCTCGCCTGCGGATTTCCGATGCGTGCGGGTGAACTCTATCGACGACGCGGACGAACAATTTGCTTACCAGACGGCGGTGAACATTGGAGGGCATGTGTTCAAAGGAATTCTGTACGACCAAGGTCCTGAATATAATTACACAGCTGGAGATGTGAGCACCCCCGCCAGCGTAGTCGGAGTTCAACCATTGAACCTCATGGCCGGTGCCGCCAGCGGCCCGTCTGTTTTAGCCTCAAGCTCAATAAGTGGCGGTGCCATGGTTTCCCCAAGTGGGGGGCTTGTGGATCCTCCTTCTTTGTATCCAGCTCCACTTGACCCCTTCATGGCTGGAGGCAGTGGTGCAGCATTCAAGTTTAAAAGGAAAAATGTAAACATTTCATGGAGATATTGCACCCTTCTTGGTCTAGCTAGGGCATGGGTTTCCCCTTGTGCAAAGCATTATGGTGATGGAAGTGTCGATCTGCGGGGATAG 759 0.5283 MAGLFSLGGGGRGTNQQQEEEEARGHHNTTTEFPPAETLYWYKNEDASSIRGFELWNQQQEQFMAGQQAYDDPSSSSRSSGMMTMRERQDFPAVVSSPADFRCVRVNSIDDADEQFAYQTAVNIGGHVFKGILYDQGPEYNYTAGDVSTPASVVGVQPLNLMAGAASGPSVLASSSISGGAMVSPSGGLVDPPSLYPAPLDPFMAGGSGAAFKFKRKNVNISWRYCTLLGLARAWVSPCAKHYGDGSVDLRG 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g0025 252 Pfam Domain of unknown function (DUF702) 73 139 - -
Lele53g0025 252 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 79 201 IPR007818 GO:0003700|GO:0006355
Lele53g0025 252 MobiDBLite consensus disorder prediction 1 36 - -
Lele53g0025 252 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 91 138 IPR006511 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g0025 Lele-ChrLele53 230147 233287 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g0025 79 208 C2H2 Transcription Factor Family AT1G19790 46.617 6.11e-28 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Lele53g0025 DUF702 7.9e-25 No_clan